
PFRMAT AL
TARGET T0102
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=4.15 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: ribokinase
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1rkd
G   6     H    35 
I   7     Y    36 
P   8     Q    37 
A   9     V    38 
A  10     A    39 
V  11     F    40 
A  12     G    41 
G  13     G    42 
T  14     K    43 
V  15     G    44 
L  16     A    45 
N  17     N    46 
V  18     Q    47 
V  19     A    48 
E  20     V    49 
A  21     A    50 
G  22     A    51 
G  23     G    52 
W  24     R    53 
V  25     S    54 
I  28     N    57 
V  29     I    58 
S  30     A    59 
I  31     F    60 
L  32     I    61 
T  33     A    62 
A  34     C    63 
V  35     T    64 
G  36     G    65 
S  37     S    68 
G  38     I    69 
G  39     G    70 
L  40     E    71 
S  41     S    72 
L  42     V    73 
L  43     R    74 
A  44     Q    75 
A  45     Q    76 
A  46     L    77 
G  47     A    78 
R  48     T    79 
E  49     D    80 
S  50     N    81 
I  51     I    82 
K  52     D    83 
A  53     I    84 
Y  54     T    85 
L  55     P    86 
K  56     V    87 
K  57     S    88 
E  58     V    89 
I  59     I    90 
K  60     K    91 
K  61     G    92 
K  62     E    93 
G  63     S    94 
K  64     T    95 
R  65     G    96 
A  66     V    97 
V  67     A    98 
I  68     L    99 
A  69     I   100 
W  70     F   101 
TER
END

