
PFRMAT AL
TARGET T0102
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 1aps
A 2 A 30
K 3 R 31
E 4 K 32
F 5 I 33
G 6 G 34
I 7 V 35
P 8 V 36
A 9 G 37
A 10 W 38
V 11 V 39
A 12 K 44
G 13 G 45
T 14 T 46
V 15 V 47
L 16 T 48
N 17 G 49
V 18 Q 50
V 19 V 51
E 20 Q 52
A 21 G 53
G 22 E 55
G 23 E 56
W 24 K 57
V 25 V 58
T 26 N 59
T 27 S 60
I 28 M 61
V 29 K 62
S 30 S 63
I 31 W 64
L 32 L 65
T 33 S 66
A 34 K 67
V 35 V 68
G 36 G 69
S 37 S 70
G 38 P 71
L 40 S 72
S 41 S 73
L 42 R 74
L 43 I 75
A 44 D 76
A 45 R 77
A 46 T 78
G 47 N 79
R 48 F 80
E 49 S 81
S 50 N 82
I 51 E 83
K 52 K 84
A 53 T 85
Y 54 I 86
L 55 S 87
K 56 K 88
K 57 L 89
E 58 E 90
I 59 Y 91
K 60 S 92
K 61 N 93
K 62 F 94
G 63 S 95
K 64 V 96
R 65 R 97
TER
END

