
PFRMAT AL
TARGET T0102
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.90 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1iba
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1iba
M   1     M    15 
A   2     A    16 
K   3     P    17 
E   4     A    18 
F   5     L    19 
G   6     V    20 
I   7     A    21 
P   8     A    22 
A   9     F    23 
A  10     G    24 
V  11     G    25 
A  12     K    26 
G  13     E    27 
T  14     N    28 
V  15     I    29 
L  16     T    30 
N  17     N    31 
V  18     L    32 
V  19     D    33 
E  20     A    34 
A  21     C    35 
G  22     I    36 
G  23     T    37 
W  24     R    38 
V  25     L    39 
T  26     R    40 
T  27     V    41 
I  28     S    42 
V  29     V    43 
S  30     A    44 
I  31     D    45 
L  32     V    46 
T  33     S    47 
A  34     K    48 
V  35     V    49 
G  36     D    50 
S  37     Q    51 
G  38     A    52 
G  39     G    53 
L  40     L    54 
S  41     K    55 
L  42     K    56 
L  43     L    57 
A  44     G    58 
A  45     A    59 
A  46     A    60 
G  47     G    61 
R  48     V    62 
E  49     V    63 
S  50     V    64 
I  51     V    69 
K  52     Q    70 
A  53     A    71 
Y  54     I    72 
L  55     F    73 
K  56     S    77 
K  57     D    78 
E  58     N    79 
I  59     L    80 
K  60     K    81 
K  61     T    82 
K  62     E    83 
G  63     M    84 
K  64     D    85 
R  65     E    86 
A  66     Y    87 
V  67     I    88 
I  68     R    89 
A  69     N    90 
W  70     F    91 
TER
END

