
PFRMAT AL
TARGET T0105
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.73 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1ak0
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1ak0
D 595     D   127
E 596     E   128
N 597     A   129
I 598     Y   130
N 599     A   131
F 600     V   132
K 601     G   133
Q 602     G   134
S 603     N   135
E 604     K   136
L 605     I   137
P 606     N   138
V 607     V   139
T 608     T   140
C 609     F   141
G 610     D   142
E 611     G   143
V 612     Y   144
K 613     H   145
G 614     D   146
T 615     N   147
L 616     L   148
Y 617     H   149
K 618     D   153
E 619     T   154
R 620     Y   155
F 621     M   156
K 622     P   157
Q 623     Q   158
G 624     K   159
T 625     L   160
S 626     I   161
K 627     G   162
K 628     G   163
C 629     H   164
I 630     A   165
Q 631     L   166
S 632     S   167
E 633     D   168
D 634     A   169
K 635     E   170
K 636     S   171
W 637     W   172
F 638     A   173
T 639     K   174
P 640     T   175
R 641     Q   178
E 642     N   179
F 643     I   180
E 644     E   181
I 645     S   182
E 646     G   183
G 647     N   184
D 648     Y   185
R 649     T   186
G 650     A   187
A 651     Q   188
S 652     A   189
K 653     I   190
N 654     G   191
W 655     W   192
K 656     I   202
L 657     T   203
S 658     T   204
I 659     A   205
R 660     T   206
C 661     R   207
G 662     W   208
G 663     A   209
Y 664     S   210
T 665     D   211
L 666     A   212
K 667     N   213
V 668     A   214
L 669     L   215
M 670     V   216
E 671     C   217
N 672     T   218
K 673     V   219
F 674     V   220
L 675     M   221
P 676     P   222
E 677     H   223
P 678     G   224
P 679     A   225
S 680     A   226
T 681     A   227
R 682     L   228
K 683     Q   229
K 684     T   230
V 685     G   231
T 686     D   232
I 687     L   233
K 688     Y   234
TER
END

