
PFRMAT AL
TARGET T0105
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.73 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1igna2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1ign_A
N 597     K   446
I 598     R   447
N 599     K   448
F 600     F   449
K 601     S   450
Q 602     A   451
S 603     D   452
E 604     E   453
L 605     D   454
P 606     Y   455
V 607     T   456
T 608     L   457
C 609     A   458
G 610     I   459
E 611     A   460
V 612     V   461
K 613     K   462
G 614     K   463
T 615     Q   464
L 616     F   465
Y 617     Y   466
K 618     R   467
E 619     D   468
R 620     L   469
F 621     F   470
K 622     Q   471
Q 623     P   474
G 624     D   475
T 625     T   476
S 626     G   477
K 627     R   478
K 628     S   479
C 629     L   480
I 630     I   481
Q 631     R   513
S 632     T   514
E 633     Q   515
D 634     S   516
K 635     R   517
K 636     R   518
W 637     G   519
F 638     P   520
T 639     I   521
P 640     A   522
R 641     K   527
E 642     H   528
F 643     F   529
E 644     A   530
I 645     E   531
E 646     E   532
G 647     H   533
D 648     A   534
R 649     A   535
G 650     H   536
A 651     T   537
S 652     E   538
K 653     N   539
N 654     A   540
W 655     W   541
K 656     R   542
L 657     D   543
S 658     R   544
I 659     F   545
R 660     R   546
C 661     L   549
G 662     L   550
G 663     A   551
Y 664     Y   552
T 665     G   553
L 666     I   554
K 667     D   555
V 668     D   556
L 669     Y   557
M 670     I   558
E 671     S   559
N 672     Y   560
K 673     Y   561
F 674     E   562
L 675     A   563
P 676     E   564
E 677     E   572
P 678     P   573
P 679     M   574
S 680     K   575
T 681     N   576
R 682     L   577
K 683     T   578
K 684     P   587
V 685     T   588
T 686     P   589
I 687     G   590
K 688     N   591
TER
END

