
PFRMAT AL
TARGET T0105
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.42 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: COX2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 2occ_B
D 595     D   158
E 596     V   159
N 597     L   160
I 598     H   161
N 599     S   162
F 600     W   163
K 601     A   164
Q 602     V   165
S 603     P   166
E 604     S   167
L 605     L   168
P 606     G   169
V 607     L   170
T 608     K   171
C 609     T   172
G 610     D   173
E 611     A   174
V 612     I   175
K 613     P   176
G 614     G   177
T 615     R   178
L 616     L   179
Y 617     N   180
K 618     Q   181
E 619     T   182
R 620     T   183
F 621     L   184
K 622     M   185
Q 623     S   186
G 624     S   187
T 625     R   188
S 626     P   189
K 627     G   190
K 628     L   191
C 629     Y   192
I 630     Y   193
Q 631     G   194
S 632     Q   195
E 633     G   201
D 634     S   202
K 635     N   203
K 636     H   204
W 637     S   205
F 638     F   206
T 639     M   207
P 640     P   208
R 641     I   209
E 642     V   210
F 643     L   211
E 644     E   212
I 645     L   213
E 646     V   214
G 647     P   215
R 649     L   216
G 650     K   217
A 651     Y   218
S 652     F   219
K 653     E   220
N 654     K   221
W 655     W   222
K 656     S   223
L 657     A   224
S 658     S   225
I 659     M   226
R 660     L   227
TER
END

