
PFRMAT AL
TARGET T0105
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1cfb
D  595 I 610
E  596 V 611
N  597 Q 612
I  598 D 613
N  599 V 614
F  600 P 615
K  601 N 616
Q  602 A 617
S  603 P 618
E  604 K 619
L  605 L 620
P  606 T 621
V  607 I 623
T  608 T 624
C  609 C 625
G  610 Q 626
E  611 A 627
V  612 D 628
K  613 K 629
G  614 A 630
T  615 E 631
L  616 I 632
Y  617 H 633
K  618 W 634
E  619 E 635
R  620 Q 636
F  621 Q 637
K  622 G 638
Q  623 D 639
G  624 N 640
T  625 R 641
S  626 S 642
K  627 P 643
K  628 Y 647
C  629 T 648
I  630 I 649
Q  631 Q 650
S  632 F 651
E  633 N 652
D  634 T 653
K  635 S 654
F  638 F 655
T  639 T 656
P  640 P 657
R  641 A 658
E  642 S 659
F  643 W 660
E  644 D 661
I  645 A 662
E  646 A 663
G  647 Y 664
D  648 E 665
R  649 K 666
G  650 V 667
A  651 P 668
S  652 N 669
K  653 T 670
N  654 D 671
W  655 S 672
K  656 S 673
L  657 F 674
S  658 V 675
I  659 V 676
R  660 Q 677
C  661 M 678
G  662 S 679
G  663 P 680
Y  664 W 681
T  665 T 685
L  666 F 686
K  667 R 687
V  668 V 688
L  669 I 689
M  670 A 690
E  671 F 691
N  672 N 692
K  673 K 693
F  674 I 694
L  675 G 695
P  676 A 696
E  677 S 697
P  678 P 698
P  679 P 699
S  680 S 700
T  681 A 701
R  682 S 703
K  683 D 704
K  684 S 705
V  685 C 706
T  686 T 707
I  687 T 708
K  688 Q 709
TER
END

