
PFRMAT AL
TARGET T0105
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1b7f_A
N  597 G 205
I  598 E 206
N  599 S 207
F  600 I 208
K  601 K 209
Q  602 D 210
S  603 T 211
E  604 N 212
L  605 L 213
P  606 Y 214
V  607 V 215
T  608 T 216
C  609 P 219
G  610 R 220
E  611 T 221
V  612 I 222
K  613 T 223
G  614 D 224
T  615 D 225
L  616 Q 226
Y  617 L 227
K  618 D 228
E  619 T 229
R  620 I 230
F  621 F 231
G  624 G 232
T  625 K 233
S  626 Y 234
K  627 G 235
K  628 S 236
C  629 I 237
I  630 V 238
Q  631 Q 239
F  643 K 240
E  644 N 241
I  645 I 242
E  646 L 243
G  647 R 244
D  648 D 245
R  649 K 246
G  650 L 247
A  651 T 248
S  652 G 249
K  653 R 250
N  654 R 252
W  655 G 253
K  656 V 254
L  657 A 255
S  658 F 256
I  659 V 257
R  660 R 258
C  661 Y 259
G  662 N 260
G  663 K 261
Y  664 R 262
T  665 E 263
L  666 A 265
K  667 Q 266
V  668 E 267
L  669 A 268
M  670 I 269
E  671 S 270
N  672 N 273
K  673 N 274
F  674 V 275
L  675 I 276
P  676 P 277
E  677 E 278
P  678 G 279
P  679 G 280
S  680 S 281
T  681 Q 282
R  682 P 283
K  683 L 284
K  684 S 285
V  685 V 286
T  686 R 287
I  687 L 288
K  688 A 289
TER
END

