
PFRMAT AL
TARGET T0106
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 2abd
T 29 S 1
Q 30 Q 2
A 31 A 3
N 32 E 4
A 33 F 5
I 34 D 6
L 35 K 7
A 36 A 8
M 37 A 9
E 38 E 10
Q 39 E 11
F 40 V 12
E 41 K 13
G 42 H 14
L 43 L 15
G 45 K 16
T 46 T 17
H 47 K 18
C 48 P 19
S 49 A 20
P 50 D 21
D 51 E 22
L 52 E 23
L 53 M 24
F 54 L 25
F 55 F 26
L 56 I 27
C 57 Y 28
A 58 S 29
M 59 H 30
Y 60 Y 31
A 61 K 32
T 65 T 35
I 66 V 36
D 67 G 37
F 68 D 38
Q 69 I 39
H 70 N 40
E 71 T 41
P 72 E 42
I 73 R 43
K 74 P 44
P 75 G 45
C 76 M 46
K 77 L 47
S 78 D 48
V 79 F 49
C 80 K 50
E 81 G 51
R 82 K 52
A 83 A 53
R 84 K 54
Q 85 W 55
G 86 D 56
C 87 A 57
E 88 W 58
P 89 N 59
I 90 E 60
L 91 L 61
I 92 K 62
R 95 G 63
H 96 T 64
S 97 S 65
W 98 K 66
P 99 E 67
E 100 D 68
S 101 A 69
L 102 M 70
A 103 K 71
E 106 A 72
L 107 Y 73
P 108 I 74
V 109 D 75
Y 110 K 76
D 111 V 77
R 112 E 78
G 113 E 79
V 114 L 80
TER
END

