
PFRMAT AL
TARGET T0106
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1ecw_A
A 2 E 15
C 3 L 16
E 4 E 17
P 5 K 18
V 6 I 19
R 7 R 20
I 8 L 21
P 9 R 22
L 10 P 23
C 11 G 24
K 12 G 25
S 13 K 26
L 14 K 27
P 15 K 28
W 16 Y 29
E 17 M 30
M 18 L 31
T 19 K 32
K 20 H 33
M 21 V 34
P 22 E 48
N 23 S 49
H 24 L 50
L 25 L 51
S 28 E 52
T 29 N 53
Q 30 K 54
A 31 E 55
N 32 G 56
A 33 C 57
I 34 Q 58
L 35 K 59
A 36 I 60
M 37 L 61
E 38 S 62
Q 39 V 63
F 40 L 64
E 41 A 65
G 42 P 66
L 43 L 67
L 44 V 68
G 45 P 69
T 46 T 70
H 47 G 71
S 49 S 72
P 50 E 73
D 51 N 74
L 52 L 75
L 53 K 76
A 58 S 77
M 59 L 78
Y 60 Y 79
A 61 N 80
P 62 T 81
I 63 V 82
C 64 C 83
T 65 V 84
I 66 I 85
D 67 W 86
F 68 C 87
Q 69 I 88
H 70 H 89
E 71 A 90
P 72 E 91
I 73 E 92
K 74 K 93
P 75 V 94
C 76 K 95
K 77 H 96
S 78 T 97
E 81 E 98
R 82 E 99
A 83 A 100
R 84 K 101
Q 85 Q 102
G 86 I 103
C 87 V 104
E 88 Q 105
D 105 R 106
E 106 H 107
L 107 L 108
P 108 V 109
V 109 V 110
Y 110 E 111
D 111 T 112
R 112 G 113
G 113 T 114
V 114 A 115
C 115 E 116
I 116 T 117
S 117 M 118
P 118 P 119
TER
END

