
PFRMAT AL
TARGET T0107
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1srd_D
N 20 K 4
T 21 A 5
T 22 V 6
E 23 A 7
E 24 V 8
I 25 L 9
E 26 K 10
R 27 G 11
K 28 T 12
A 29 S 13
V 30 N 14
A 31 V 15
M 32 E 16
G 33 G 17
S 34 V 18
L 35 V 19
D 36 D 25
K 37 D 26
N 38 G 27
A 39 V 31
T 40 N 32
A 41 V 33
K 42 R 34
V 43 I 35
R 44 S 36
V 45 G 37
L 46 L 38
W 47 A 39
D 48 P 40
E 49 G 41
N 50 K 42
Y 51 H 43
L 52 G 44
Y 53 F 45
V 54 H 46
L 55 L 47
A 56 H 48
I 57 E 49
V 58 F 50
K 59 G 51
D 60 D 52
P 61 T 53
V 62 T 54
L 63 N 55
N 64 G 56
K 65 C 57
D 66 M 58
N 67 S 59
S 68 T 60
N 69 G 61
P 70 P 62
W 71 H 63
D 81 N 65
E 82 P 66
N 83 D 67
N 84 K 68
H 85 K 69
K 86 T 70
T 87 H 71
G 88 G 72
Y 89 A 73
Y 90 P 74
E 91 E 75
D 92 D 76
D 93 E 77
D 94 V 78
A 95 R 79
Q 96 H 80
G 110 A 81
G 111 G 82
S 112 D 83
P 113 L 84
A 114 G 85
R 115 N 86
F 116 I 87
K 117 V 88
T 118 A 89
I 123 N 90
E 124 T 91
G 125 D 92
G 126 G 93
I 128 V 94
V 129 A 95
E 130 E 96
A 131 A 97
A 132 T 98
I 133 I 99
K 134 V 100
W 135 D 101
K 136 N 102
T 137 Q 103
I 138 I 104
K 139 P 105
P 140 L 106
T 141 T 107
P 142 P 109
N 143 N 110
T 144 S 111
V 145 V 112
I 146 V 113
G 147 G 114
F 148 R 115
N 149 A 116
I 150 L 117
Q 151 V 118
V 152 V 119
D 154 D 125
A 155 L 126
N 156 G 127
E 157 K 128
K 158 G 129
G 159 G 130
Q 160 H 131
R 161 E 132
V 162 L 133
G 163 S 134
I 164 P 135
I 165 T 136
S 166 T 137
W 167 G 138
S 168 N 139
TER
END

