
PFRMAT AL
TARGET T0108
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1CFM_A
REMARK DATE	1999-04-26
REMARK SCORE	?
G 5 G 17
Q 6 R 18
Y 7 I 19
V 8 V 20
R 9 C 21
A 10 A 22
R 11 N 23
I 12 C 24
K 13 H 25
G 14 L 26
A 15 A 27
Y 16 Q 28
Y 17 K 29
A 18 A 30
T 19 V 31
P 20 E 32
V 21 I 33
D 22 E 34
P 23 V 35
V 24 P 36
T 25 Q 37
N 26 A 38
Q 27 V 39
P 28 L 40
T 29 P 41
A 30 D 42
P 31 T 43
K 32 V 44
D 33 F 45
F 34 E 46
S 35 A 47
S 36 V 48
G 37 I 49
F 38 E 50
W 39 L 51
D 40 P 52
F 41 Y 53
N 42 D 54
D 43 K 55
G 44 Q 56
T 45 V 57
T 46 K 58
Q 47 Q 59
G 48 V 60
F 49 L 61
G 50 A 62
V 51 N 63
N 52 G 64
P 53 K 65
D 54 K 66
S 55 G 67
P 56 V 71
I 57 G 72
T 58 M 73
A 59 V 74
I 60 L 75
N 61 I 76
V 62 L 77
E 63 P 78
TER
END

