
PFRMAT AL
TARGET T0109
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  1
PARENT 1QQC_A
REMARK DATE	1999-10-13
REMARK SCORE	 0.009	34.2	24/123 (19%)
K 5 E 134
Q 6 L 135
N 7 R 136
L 8 M 137
I 9 L 138
W 10 A 139
I 11 F 140
D 12 D 141
L 13 I 142
E 14 E 143
M 15 T 144
L 18 L 145
D 19 Y 146
P 20 H 147
E 21 E 148
K 22 G 149
E 23 E 150
R 24 E 151
I 25 F 152
A 41 G 153
E 42 E 154
G 43 G 155
P 44 P 156
V 45 I 157
L 46 L 158
A 47 M 159
V 48 I 160
H 49 S 161
Q 50 Y 162
S 51 A 163
D 52 D 164
E 53 E 165
L 54 E 166
L 55 G 167
N 56 A 168
K 57 R 169
M 58 V 170
N 59 I 171
D 60 T 172
W 61 W 173
N 69 K 174
G 70 N 175
L 71 I 176
I 72 D 177
E 73 L 178
R 74 P 179
I 75 Y 180
K 76 V 181
A 77 E 182
S 78 S 183
K 79 V 184
L 80 S 185
T 81 T 186
E 82 E 187
R 83 K 188
A 84 E 189
A 85 M 190
E 86 I 191
L 87 K 192
Q 88 R 193
T 89 F 194
L 90 L 195
D 91 K 196
F 92 V 197
L 93 I 198
K 94 Q 199
K 95 E 200
W 96 K 201
V 97 D 202
P 98 P 203
A 101 D 204
S 102 V 205
P 103 L 206
I 104 I 207
C 105 T 208
G 106 Y 209
N 107 N 210
S 108 G 211
I 109 D 212
A 110 N 213
Q 111 F 214
D 112 D 215
K 113 F 216
R 114 A 217
F 115 Y 218
L 116 L 219
V 117 K 220
K 118 K 221
Y 119 R 222
M 120 S 223
P 121 E 224
D 122 M 225
L 123 L 226
A 124 G 227
D 125 V 228
Y 126 K 229
F 127 F 230
TER
END

