
PFRMAT AL
TARGET T0109
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  4
PARENT 1DEQ_O
REMARK DATE	2000-02-02
REMARK SCORE	 1.5	26.8	19/136 (13%)
P 44 Q 90
V 45 D 91
L 46 T 92
A 47 L 93
V 48 V 94
H 49 R 95
Q 50 Q 96
S 51 E 97
D 52 R 98
E 53 P 99
L 54 I 100
L 55 R 101
N 56 K 102
K 57 S 103
M 58 I 104
N 59 E 105
D 60 D 106
W 61 L 107
C 62 S 119
Q 63 S 120
K 64 T 121
T 65 F 122
H 66 Q 123
S 67 Y 124
E 68 I 125
N 69 T 126
L 71 L 127
I 72 L 128
E 73 K 129
R 74 N 130
I 75 M 131
K 76 R 135
A 77 Q 136
S 78 N 137
K 79 Q 138
L 80 V 139
T 81 Q 140
E 82 D 141
R 83 N 142
A 84 E 143
A 85 V 145
E 86 V 146
L 87 N 147
Q 88 E 148
T 89 Y 149
L 90 S 150
D 91 S 151
F 92 H 152
L 93 L 153
K 94 E 154
K 95 K 155
W 96 H 156
V 97 Q 157
P 98 L 158
K 99 Y 159
G 100 I 160
A 101 D 161
S 102 E 162
P 103 T 163
C 105 V 164
G 106 K 165
N 107 N 166
S 108 N 167
I 109 I 168
A 110 P 169
Q 111 T 170
D 112 K 171
K 113 L 172
R 114 R 173
F 115 V 174
L 116 L 175
V 117 R 176
K 118 S 177
Y 119 I 178
M 120 L 179
P 121 E 180
D 122 N 181
L 123 L 182
A 124 R 183
D 125 S 184
Y 126 K 185
F 127 I 186
H 128 Q 187
Y 129 K 188
R 130 L 189
H 131 E 190
L 132 S 191
D 133 D 192
V 134 V 193
S 135 S 194
T 136 T 195
L 137 Q 196
K 138 M 197
E 139 E 198
L 140 Y 199
A 141 C 200
A 142 R 201
R 143 T 202
W 144 P 203
K 145 C 204
TER
END

