
PFRMAT AL
TARGET T0109
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1D9F_A
REMARK DATE	1999-12-01
REMARK SCORE	?
F 3 L 346
D 4 E 347
K 5 K 348
Q 6 A 349
N 7 P 350
L 8 V 351
I 9 F 352
W 10 A 353
I 11 F 354
D 12 D 355
L 13 T 356
E 14 E 357
M 15 T 358
T 16 D 359
G 17 S 360
L 18 L 361
D 19 D 362
P 20 N 363
E 21 I 364
K 22 S 365
E 23 A 366
R 24 N 367
I 25 L 368
I 26 V 369
E 27 G 370
I 28 L 371
A 29 S 372
T 30 F 373
I 31 A 374
V 32 I 375
T 33 E 376
D 34 P 377
K 35 G 378
N 36 V 379
L 37 A 380
N 38 A 381
I 39 Y 382
L 40 I 383
A 41 P 384
E 42 V 385
G 43 A 386
P 44 H 387
V 45 D 388
L 46 Y 389
A 47 L 390
V 48 D 391
H 49 A 392
Q 50 P 393
S 51 D 394
D 52 Q 395
E 53 I 396
L 54 S 397
L 55 R 398
N 56 E 399
K 57 R 400
M 58 A 401
N 59 L 402
D 60 E 403
W 61 L 404
C 62 L 405
Q 63 K 406
K 64 P 407
T 65 L 408
H 66 L 409
S 67 E 410
E 68 D 411
N 69 E 412
G 70 K 413
L 71 A 414
I 72 L 415
E 73 K 416
R 74 V 417
I 75 G 418
K 76 Q 419
A 77 N 420
S 78 L 421
K 79 K 422
L 80 Y 423
T 81 D 424
E 82 R 425
R 83 G 426
A 84 I 427
A 85 L 428
E 86 A 429
L 87 N 430
Q 88 E 434
T 89 L 435
L 90 R 436
D 91 G 437
F 92 I 438
L 93 A 439
K 94 S 446
K 95 Y 447
W 96 I 448
V 97 L 449
P 98 N 450
K 99 S 451
G 100 V 452
A 101 A 453
S 102 G 454
P 103 R 455
I 104 H 456
C 105 D 457
G 106 M 458
N 107 D 459
S 108 S 460
I 109 L 461
A 110 A 462
Q 111 E 463
D 112 R 464
K 113 W 465
R 114 L 466
F 115 K 467
L 116 H 468
V 117 K 469
K 118 T 470
Y 119 I 471
M 120 T 472
P 121 F 473
D 122 E 474
L 123 E 475
A 124 E 493
D 125 A 494
Y 126 G 495
F 127 R 496
H 128 Y 497
Y 129 A 498
R 130 A 499
H 131 E 500
L 132 D 501
D 133 A 502
V 134 D 503
S 135 V 504
T 136 T 505
L 137 L 506
K 138 Q 507
E 139 L 508
L 140 H 509
A 141 L 510
A 142 K 511
R 143 M 512
W 144 W 513
K 145 P 514
P 146 D 515
E 147 L 516
I 148 Q 517
L 149 K 518
TER
END

