
PFRMAT AL
TARGET T0110
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.04 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: dutpase
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1dun
F   5     M     1
K   6     L     2
R   7     A     3
S   8     Y     4
D   9     Q     5
R  10     G     6
A  20     T     7
V  21     Q     8
I  22     I     9
L  23     K    10
Q  24     E    11
R  25     K    12
E  26     R    13
V  27     D    14
K  28     E    15
D  29     D    16
P  30     A    17
R  31     G    18
I  32     F    19
G  33     D    20
M  34     L    21
V  35     C    22
T  36     V    23
V  37     P    24
S  38     Y    25
E  41     D    26
V  42     I    27
S  43     M    28
S  44     I    29
D  45     P    30
L  46     V    31
S  47     S    32
Y  48     D    33
A  49     T    34
K  50     K    35
I  51     I    36
F  52     I    37
V  53     P    38
T  54     T    39
F  55     Q    44
L  56     V    45
D  58     P    46
H  59     P    47
D  60     N    48
E  61     S    49
M  62     F    50
A  63     G    51
I  64     W    52
E  65     V    53
Q  66     T    54
G  67     G    55
M  68     K    56
K  69     S    57
G  70     S    58
L  71     M    59
E  72     A    60
K  73     K    61
S  75     Q    62
P  76     G    63
Y  77     L    64
I  78     L    65
R  79     I    66
S  80     N    67
G  83     G    68
K  84     G    69
A  85     I    70
M  86     I    71
R  87     D    72
L  88     E    73
R  89     G    74
I  90     Y    75
V  91     T    76
P  92     G    77
E  93     E    78
I  94     I    79
R  95     Q    80
F  96     V    81
I  97     I    82
Y  98     C    83
D  99     T    84
Q 100     N    85
S 101     K    92
L 102     L    93
V 103     I    94
E 104     E    95
G 105     G    96
M 106     Q    97
R 107     K    98
M 108     F    99
S 109     A   100
N 110     Q   101
L 111     L   102
V 112     I   103
T 113     I   104
N 114     L   105
V 115     Q   106
V 116     H   107
R 117     H   108
E 118     S   109
D 119     N   110
E 120     S   111
K 121     R   112
K 122     Q   113
H 123     P   114
V 124     W   115
E 125     D   116
E 126     E   117
S 127     N   118
N 128     K   119
TER
END

