
PFRMAT AL
TARGET T0110
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.97 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1rcb
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1rcb
K   6     H     1
R   7     K     2
S   8     C     3
D   9     D     4
R  10     I     5
V  11     T     6
A  12     L     7
Q  13     Q     8
E  14     E     9
I  15     I    10
Q  16     I    11
K  17     K    12
E  18     T    13
I  19     L    14
A  20     N    15
V  21     S    16
I  22     L    17
L  23     T    18
Q  24     E    19
R  25     Q    20
E  26     K    21
V  27     T    22
K  28     L    23
D  29     C    24
P  30     T    25
R  31     E    26
I  32     L    27
G  33     T    28
M  34     V    29
V  35     T    30
T  36     D    31
V  37     I    32
S  38     F    33
D  39     A    34
V  40     A    35
E  41     S    36
V  42     E    41
S  43     K    42
S  44     E    43
D  45     T    44
L  46     F    45
S  47     C    46
Y  48     R    47
A  49     A    48
K  50     A    49
I  51     T    50
F  52     V    51
V  53     L    52
T  54     R    53
F  55     Q    54
L  56     F    55
F  57     Y    56
D  58     S    57
H  59     H    58
D  60     H    59
E  61     E    60
M  62     K    61
A  63     A    68
I  64     T    69
E  65     A    70
Q  66     Q    71
G  67     Q    72
M  68     F    73
K  69     H    74
G  70     R    75
L  71     H    76
E  72     K    77
K  73     Q    78
A  74     L    79
S  75     I    80
P  76     R    81
Y  77     F    82
I  78     L    83
R  79     K    84
S  80     R    85
L  81     L    86
L  82     D    87
G  83     R    88
K  84     N    89
A  85     L    90
M  86     W    91
R  87     G    92
L  88     L    93
R  89     A    94
I  90     G    95
V  91     L    96
P  92     N    97
E  93     S    98
I  94     C    99
R  95     P   100
F  96     V   101
I  97     K   102
Y  98     E   103
D  99     A   104
Q 100     N   105
G 105     Q   106
M 106     S   107
R 107     T   108
M 108     L   109
S 109     E   110
N 110     N   111
L 111     F   112
V 112     L   113
T 113     E   114
N 114     R   115
V 115     L   116
V 116     K   117
R 117     T   118
E 118     I   119
D 119     M   120
E 120     R   121
K 121     E   122
K 122     K   123
H 123     Y   124
V 124     S   125
E 125     K   126
E 126     C   127
S 127     S   128
N 128     S   129
TER
END

