
PFRMAT AL
TARGET T0110
AUTHOR 4216-9015-4014
REMARK Predictor remarks
METHOD 
METHOD Work by Kelley LA, MacCallum RM & Sternberg MJE
METHOD Biomolecular Modelling Laboratory
METHOD Imperial Cancer Research Fund
METHOD 44 Lincoln's Inn Fields
METHOD London WC2A 3PX, England 
METHOD Tel +44-(0)20-7269-3565 / 3242
METHOD FAX +44-(0)20-7269-3534
METHOD
METHOD Using the results from the 3D-PSSM server:
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD The top-ranking hit was to the parent 1ega chain A.
METHOD This hit was used due to the apparently good match of secondary
METHOD structure elements.
METHOD The automatic alignment has been slightly edited to preserve 
METHOD the hydrophobic core and the continuity of the secondary 
METHOD structure elements.

MODEL 1
PARENT 1ega_A
M    1 Y 184
A    2 I 185
R    3 T 186
E    4 D 187
F    5 R 188
K    6 S 189
R    7 Q 190
S    8 R 191
D    9 F 192
R   10 M 193
V   11 A 194
A   12 S 195
Q   13 E 196
E   14 I 197
I   15 I 198
Q   16 R 199
K   17 E 200
E   18 K 201
I   19 L 202
A   20 M 203
V   21 R 204
I   22 F 205
L   23 L 206
Q   24 G 207
R   25 A 208
E   26 E 209
V   27 L 210
P   30 P 211
R   31 Y 212
I   32 S 213
G   33 V 214
M   34 T 215
V   35 V 216
T   36 E 217
V   37 I 218
S   38 E 219
D   39 R 220
V   40 F 221
E   41 V 222
S   43 S 223
S   44 N 224
D   45 E 225
L   46 R 226
S   47 G 227
Y   48 G 228
A   49 Y 229
K   50 D 230
I   51 I 231
F   52 N 232
V   53 G 233
T   54 L 234
F   55 I 235
L   56 L 236
F   57 V 237
D   58 E 238
E   61 R 239
M   62 E 240
A   63 G 241
I   64 Q 242
E   65 K 243
Q   66 K 244
G   67 M 245
M   68 V 246
K   69 I 247
G   70 G 248
L   71 N 249
E   72 K 250
K   73 G 251
A   74 K 253
S   75 I 254
P   76 K 255
Y   77 T 256
I   78 I 257
R   79 G 258
S   80 I 259
L   81 E 260
L   82 A 261
G   83 R 262
K   84 K 263
A   85 D 264
M   86 M 265
R   87 Q 266
L   88 F 269
R   89 E 270
I   90 A 271
V   91 P 272
P   92 V 273
E   93 H 274
I   94 L 275
R   95 E 276
F   96 L 277
I   97 W 278
Y   98 V 279
D   99 K 280
Q  100 V 281
S  101 K 282
L  102 S 283
V  103 G 284
E  104 W 285
G  105 A 286
M  106 D 287
R  107 D 288
M  108 E 289
S  109 R 290
N  110 A 291
L  111 L 292
V  112 R 293
T  113 S 294
N  114 L 295
TER
END


