
PFRMAT AL
TARGET T0110
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1d0n_A
E   26 R 629
V   27 L 630
K   28 K 631
D   29 D 632
P   30 P 640
R   31 R 641
I   32 L 642
G   33 F 643
M   34 A 644
V   35 C 645
T   36 S 646
V   37 I 654
S   38 E 655
D   39 E 656
V   40 V 657
E   41 L 666
V   42 A 667
S   43 T 668
S   44 D 669
D   45 D 670
L   46 L 673
S   47 L 674
Y   48 D 675
A   49 T 676
K   50 Q 679
I   51 V 680
F   52 F 681
V   53 V 682
T   54 W 683
F   55 V 684
H   59 G 685
D   60 K 686
E   61 D 687
M   62 S 688
A   63 Q 689
I   64 D 690
E   65 E 691
Q   66 E 692
G   67 K 693
M   68 T 694
K   69 E 695
G   70 A 696
L   71 L 697
E   72 T 698
K   73 S 699
A   74 A 700
S   75 K 701
P   76 R 702
Y   77 Y 703
I   78 I 704
R   79 D 705
S   80 T 706
L   81 D 707
L   82 P 708
G   83 A 709
K   84 H 710
A   85 R 711
M   86 D 712
R   89 R 713
I   90 R 714
V   91 T 715
P   92 P 716
I   94 I 717
R   95 T 718
F   96 V 719
I   97 V 720
Y   98 K 721
D   99 D 737
Q  100 D 738
S  101 S 739
L  102 Y 740
V  103 W 741
E  104 S 742
G  105 V 743
M  106 D 744
R  107 P 745
M  108 L 746
S  109 D 747
N  110 R 748
L  111 A 749
V  112 L 750
T  113 A 751
N  114 E 752
V  115 L 753
V  116 A 754
R  117 A 755
TER
END

