

PFRMAT AL
TARGET T0110
AUTHOR 9885-9936-6780
METHOD Smith-Waterman Alignment alignment of secondary structure
METHOD annotated sequence
MODEL 1
PARENT 1ega_A
M    1   E  182
A    2   D  183
R    3   Y  184
E    4   I  185
F    5   T  186
K    6   D  187
R    7   R  188
S    8   S  189
D    9   Q  190
R   10   R  191
V   11   M  193
A   12   A  194
Q   13   S  195
E   14   E  196
I   15   I  197
Q   16   I  198
K   17   R  199
E   18   E  200
I   19   L  202
A   20   M  203
V   21   R  204
I   22   F  205
L   23   L  206
Q   24   G  207
R   25   A  208
E   26   E  209
V   27   L  210
P   30   P  211
I   32   Y  212
G   33   S  213
V   35   V  214
T   36   T  215
V   37   V  216
S   38   E  217
D   39   E  219
V   40   R  220
E   41   F  221
V   42   V  222
S   43   S  223
S   44   N  224
D   45   E  225
L   46   R  226
S   47   G  227
Y   48   Y  229
A   49   D  230
K   50   I  231
I   51   N  232
F   52   G  233
V   53   L  234
T   54   I  235
F   55   L  236
L   56   V  237
F   57   E  238
H   59   R  239
D   60   G  241
E   61   Q  242
M   62   K  243
A   63   K  244
I   64   M  245
E   65   V  246
Q   66   I  247
G   67   G  248
M   68   N  249
K   69   K  250
G   70   G  251
L   71   A  252
E   72   K  253
K   73   I  254
A   74   K  255
S   75   T  256
P   76   I  257
Y   77   G  258
I   78   I  259
R   79   E  260
S   80   A  261
L   81   D  264
L   82   M  265
G   83   Q  266
K   84   E  267
A   85   M  268
M   86   F  269
R   87   E  270
L   88   A  271
R   89   V  273
I   90   H  274
P   92   L  275
E   93   E  276
I   94   L  277
R   95   W  278
F   96   V  279
I   97   K  280
Y   98   V  281
D   99   K  282
Q  100   S  283
S  101   G  284
L  102   W  285
V  103   A  286
E  104   D  287
G  105   D  288
M  106   E  289
R  107   R  290
M  108   A  291
S  109   L  292
TER
END
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Ajay K. Royyuru, PhD                   Phone: (914) 945-1335
Manager, Structural Biology            Fax: (914) 945-4104
Computational Biology Center          mailto:ajayr@us.ibm.com
IBM Research                                 --- IBM Internal ---
T. J. Watson Research Center           Phone: T/L 862-1335
P.O. Box 218, Route 134                  Fax: T/L 862-4104
Yorktown Heights, NY 10598            Office: 13-106D


