
PFRMAT AL
TARGET T0110
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 3its
Q 13 R 7
E 14 E 8
I 15 L 9
Q 16 I 10
K 17 E 11
E 18 E 12
I 19 L 13
A 20 V 14
V 21 N 15
I 22 I 16
L 23 T 17
Q 24 Q 18
R 25 N 19
E 26 Q 20
K 28 K 21
D 29 A 22
P 30 P 23
R 31 L 24
I 32 C 25
G 33 N 26
M 34 G 27
V 35 S 28
T 36 M 29
V 37 V 30
S 38 W 31
D 39 S 32
V 40 I 33
E 41 N 34
V 42 L 35
S 43 T 36
S 44 A 37
D 45 G 38
L 46 M 39
S 47 Y 40
Y 48 C 41
A 49 A 42
K 50 A 43
I 51 L 44
V 53 I 48
T 54 N 49
F 55 V 50
L 56 S 51
F 57 G 52
D 58 C 53
H 59 S 54
D 60 A 55
E 61 I 56
M 62 E 57
A 63 K 58
I 64 T 59
E 65 Q 60
Q 66 R 61
G 67 M 62
M 68 L 63
K 69 S 64
G 70 G 65
L 71 F 66
E 72 K 70
K 73 V 71
A 74 S 72
S 75 A 73
P 76 G 74
Y 77 Q 75
I 78 F 76
R 79 S 77
S 80 S 78
L 81 L 79
L 82 H 80
I 97 V 81
Y 98 R 82
D 99 D 83
Q 100 T 84
S 101 K 85
L 102 I 86
V 103 E 87
E 104 V 88
G 105 A 89
M 106 Q 90
R 107 F 91
M 108 V 92
S 109 K 93
N 110 D 94
L 111 L 95
V 112 L 96
T 113 L 97
N 114 H 98
V 115 L 99
V 116 K 100
R 117 K 101
TER
END

