
PFRMAT AL
TARGET T0110
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 8cat_B
M 1 M 391
A 2 C 392
R 3 M 393
E 4 M 394
F 5 D 395
K 6 N 396
R 7 Q 397
S 8 G 398
D 9 G 399
R 10 A 400
V 11 P 401
A 12 N 402
Q 13 Y 403
E 14 Y 404
I 15 P 405
Q 16 N 406
K 17 S 407
E 18 F 408
I 19 S 409
A 20 A 410
V 21 P 411
I 22 E 412
L 23 H 413
Q 24 Q 414
R 25 P 415
E 26 S 416
V 27 A 417
K 28 L 418
D 29 E 419
P 30 H 420
R 31 R 421
I 32 T 422
G 33 H 423
M 34 F 424
V 35 S 425
T 36 G 426
V 37 D 427
S 38 V 428
D 39 Q 429
V 40 R 430
E 41 F 431
V 42 N 432
S 43 S 433
S 44 A 434
D 45 N 435
L 46 V 439
S 47 T 440
Y 48 Q 441
A 49 V 442
K 50 R 443
I 51 T 444
F 52 F 445
V 53 Y 446
T 54 L 447
F 55 K 448
L 56 V 449
F 57 L 450
D 58 N 451
H 59 E 452
D 60 E 453
E 61 Q 454
M 62 R 455
A 63 K 456
I 64 C 459
E 65 E 460
Q 66 N 461
G 67 I 462
M 68 A 463
K 69 G 464
G 70 H 465
L 71 L 466
E 72 K 467
K 73 D 468
A 74 A 469
S 75 Q 470
P 76 L 471
Y 77 F 472
I 78 I 473
R 79 Q 474
S 80 K 475
L 81 K 476
L 82 A 477
G 83 V 478
K 84 K 479
A 85 N 480
F 96 F 481
I 97 S 482
Y 98 D 483
D 99 V 484
Q 100 H 485
S 101 P 486
V 103 E 487
E 104 Y 488
G 105 G 489
M 106 S 490
R 107 R 491
M 108 I 492
S 109 Q 493
N 110 A 494
L 111 L 495
V 112 L 496
T 113 D 497
N 114 K 498
V 115 Y 499
V 116 N 500
REMARK R 117 E 501
REMARK E 118 E 502
REMARK D 119 K 503
REMARK E 120 P 504
REMARK K 121 K 505
TER
END

