
PFRMAT AL
TARGET T0110
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 2C17_A
REMARK DATE	1999-07-18
REMARK SCORE	?
S 8 D 92
D 9 Q 93
R 10 K 94
V 11 L 95
A 12 E 96
Q 13 K 97
E 14 I 98
I 15 I 99
Q 16 C 100
K 17 Q 101
E 18 E 102
I 19 I 103
A 20 S 104
V 21 T 105
I 22 L 106
L 23 C 107
Q 24 D 108
R 25 M 109
E 26 L 110
V 27 A 111
K 28 T 112
D 29 H 113
P 30 N 114
R 31 G 115
I 32 Q 116
G 33 S 117
M 34 I 118
V 35 D 119
T 36 I 120
V 37 S 121
S 38 F 122
D 39 P 123
V 40 V 124
E 41 F 125
V 42 V 126
S 43 A 127
S 44 V 128
D 45 T 129
L 46 N 130
S 47 V 131
Y 48 I 132
A 49 S 133
K 50 L 134
I 51 C 136
F 52 F 137
V 53 N 138
T 54 T 139
F 55 S 140
L 56 Y 141
F 57 K 142
D 58 N 143
H 59 G 144
D 60 D 145
E 61 P 146
M 62 E 147
A 63 L 148
I 64 N 149
E 65 V 150
Q 66 I 151
G 67 Q 152
M 68 N 153
K 69 Y 154
G 70 N 155
L 71 E 156
E 72 G 157
K 73 I 158
A 74 I 159
S 75 D 160
P 76 N 161
Y 77 L 162
I 78 S 163
R 79 K 164
S 80 D 165
L 81 S 166
L 82 L 167
G 83 V 168
K 84 D 169
A 85 L 170
M 86 V 171
R 87 P 172
L 88 W 173
R 89 L 174
I 90 K 175
V 91 I 176
P 92 F 177
E 93 P 178
I 94 N 179
R 95 K 180
F 96 T 181
I 97 L 182
Y 98 E 183
D 99 K 184
Q 100 L 185
S 101 K 186
L 102 S 187
V 103 H 188
E 104 V 189
G 105 K 190
M 106 I 191
R 107 R 192
M 108 N 193
S 109 D 194
N 110 L 195
L 111 L 196
V 112 N 197
T 113 K 198
N 114 I 199
V 115 L 200
V 116 E 201
R 117 N 202
E 118 Y 203
D 119 K 204
E 120 E 205
K 121 K 206
K 122 F 207
H 123 R 208
TER
END

