
PFRMAT AL
TARGET T0110
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 1tvt
H 59 E 2
D 60 D 3
E 61 R 4
M 62 R 5
A 63 I 6
I 64 P 7
E 65 G 8
Q 66 T 9
G 67 A 10
M 68 E 11
K 69 E 12
G 70 N 13
L 71 L 14
E 72 Q 15
K 73 K 16
A 74 S 17
S 75 S 18
P 76 G 19
Y 77 G 20
I 78 V 21
R 79 Q 24
S 80 N 25
L 81 T 26
L 82 G 27
G 83 G 28
K 84 Q 29
A 85 E 30
M 86 A 31
R 87 R 32
L 88 P 33
R 89 N 34
I 90 Y 35
V 91 H 36
P 92 C 37
E 93 Q 38
I 94 L 39
R 95 C 40
F 96 F 41
I 97 L 42
Y 98 R 43
D 99 S 44
Q 100 L 45
S 101 G 46
L 102 I 47
V 103 D 48
E 104 Y 49
M 108 L 50
S 109 D 51
N 110 A 52
L 111 S 53
V 112 L 54
T 113 R 55
N 114 K 56
V 115 K 57
V 116 N 58
R 117 K 59
E 118 Q 60
D 119 R 61
E 120 L 62
K 121 K 63
TER
END

