
PFRMAT AL
TARGET T0111
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1ec8_A
S    1 F 5
K    2 T 6
I    3 T 7
V    4 P 8
K    5 V 9
I    6 V 10
I    7 T 11
G    8 E 12
R    9 M 13
E   10 Q 14
I   11 V 15
I   12 I 16
D   13 P 17
S   14 V 18
R   15 A 19
G   16 G 20
N   17 H 21
P   18 D 22
T   19 S 23
V   20 M 24
E   21 L 25
A   22 M 26
E   23 N 27
V   24 L 28
H   25 S 29
L   26 G 30
E   27 A 31
G   28 H 32
G   29 A 33
F   30 P 34
V   31 F 35
G   32 F 36
M   33 T 37
A   34 R 38
A   35 N 39
A   36 I 40
L   48 V 41
E   49 I 42
L   50 I 43
R   51 K 44
D   52 D 45
G   53 N 46
D   54 S 47
K   55 G 48
S   56 H 49
R   57 T 50
F   58 G 51
L   59 V 52
G   60 G 53
K   61 E 54
G   62 I 55
V   63 P 56
T   64 G 57
K   65 G 58
A   66 E 59
V   67 I 61
A   68 R 62
A   69 K 63
V   70 T 64
N   71 L 65
G   72 E 66
P   73 D 67
I   74 A 68
A   75 I 69
Q   76 P 70
A   77 L 71
L   78 V 72
I   79 V 73
G   80 G 74
K   81 K 75
D   82 T 76
A   83 L 77
K   84 G 78
D   85 E 79
Q   86 Y 80
A   87 K 81
G   88 N 82
I   89 V 83
D   90 L 84
K   91 L 86
I   92 V 87
M   93 R 88
I   94 N 89
D   95 T 90
L   96 F 91
D   97 A 92
G   98 D 93
T   99 R 94
E  100 D 95
N  101 A 96
K  102 G 97
S  103 G 98
K  104 R 99
F  105 T 108
G  106 T 109
A  107 I 110
N  108 H 111
A  109 V 112
I  110 V 113
L  111 T 114
A  112 G 115
V  113 I 116
S  114 E 117
L  115 A 118
A  116 A 119
N  117 M 120
A  118 L 121
K  119 D 122
A  120 L 123
A  121 L 124
A  122 G 125
A  123 Q 126
A  124 H 127
K  125 L 128
G  126 G 129
M  127 V 130
P  128 N 131
L  129 V 132
Y  130 A 133
E  131 S 134
H  132 L 135
I  133 L 136
A  134 G 137
E  135 D 138
L  136 G 139
N  137 Q 140
G  141 Q 141
K  142 R 142
Y  143 S 143
S  144 E 144
M  145 V 145
P  146 E 146
V  147 M 147
P  148 L 148
M  149 G 149
M  150 Y 150
N  151 L 151
I  152 F 152
I  153 F 153
N  154 V 154
G  155 G 155
G  156 N 156
E  157 R 157
H  158 K 158
A  159 A 159
D  160 T 160
N  161 P 161
N  162 L 162
V  163 P 163
D  164 Y 164
I  165 Q 165
Q  166 S 166
E  167 Q 167
F  168 P 168
M  169 D 169
I  170 D 170
Q  171 S 171
P  172 C 172
V  173 D 173
G  174 W 174
A  175 Y 175
K  176 R 176
T  177 L 177
V  178 R 178
K  179 H 179
E  180 E 180
A  181 E 181
I  182 A 182
R  183 M 183
M  184 T 184
G  185 P 185
S  186 D 186
E  187 A 187
V  188 V 188
F  189 V 189
H  190 R 190
H  191 L 191
L  192 A 192
A  193 E 193
K  194 A 194
V  195 A 195
L  196 Y 196
K  197 E 197
A  198 K 198
K  199 Y 199
G  200 G 200
M  201 F 201
N  202 N 202
T  203 D 203
V  205 F 204
G  206 K 205
D  207 L 206
E  208 K 207
G  209 G 208
G  210 G 209
A  212 V 210
P  213 L 211
N  214 A 212
L  215 G 213
G  216 E 214
S  217 E 215
N  218 E 216
A  219 A 217
E  220 E 218
A  221 S 219
L  222 I 220
A  223 V 221
V  224 A 222
I  225 L 223
A  226 A 224
E  227 Q 225
A  228 R 226
G  237 F 227
K  238 P 228
D  239 Q 229
I  240 A 230
T  241 R 231
L  242 I 232
A  243 T 233
M  244 L 234
D  245 D 235
G  263 P 236
N  264 N 237
K  265 G 238
A  266 A 239
F  267 W 240
T  268 S 241
S  269 L 242
E  270 N 243
E  271 E 244
F  272 A 245
T  273 I 246
H  274 K 247
F  275 I 248
L  276 G 249
E  277 K 250
E  278 Y 251
L  279 L 252
Q  282 K 253
Y  283 G 254
P  284 S 255
I  285 L 256
V  286 A 257
S  287 Y 258
I  288 A 259
E  289 E 260
D  290 D 261
G  291 P 262
L  292 C 263
D  293 G 264
E  294 A 265
S  295 E 266
D  296 Q 267
W  297 G 268
D  298 F 269
G  299 S 270
F  300 G 271
A  301 R 272
Y  302 E 273
Q  303 V 274
T  304 M 275
K  305 A 276
V  306 E 277
L  307 F 278
G  308 R 279
D  309 R 280
K  310 A 281
I  311 T 282
Q  312 G 283
L  313 L 284
V  314 T 286
G  315 A 287
D  316 T 288
D  317 N 289
L  318 M 290
F  319 I 291
V  320 A 292
T  321 T 293
N  322 D 294
T  323 W 295
K  324 R 296
I  325 Q 297
L  326 M 298
K  327 G 299
E  328 H 300
G  329 T 301
I  330 L 302
E  331 S 303
K  332 L 304
G  333 Q 305
A  335 S 306
N  336 V 307
S  337 D 308
I  338 I 309
L  339 P 310
I  340 L 311
K  341 A 312
F  342 D 313
N  343 P 314
Q  344 H 315
I  345 F 316
G  346 W 317
S  347 T 318
L  348 M 319
T  349 Q 320
E  350 G 321
T  351 S 322
L  352 V 323
A  353 R 324
A  354 V 325
I  355 A 326
K  356 Q 327
M  357 M 328
A  358 C 329
K  359 H 330
D  360 E 331
A  361 F 332
G  362 G 333
Y  363 L 334
T  364 T 335
V  366 W 336
I  367 G 337
S  368 S 338
H  369 H 339
R  370 S 340
S  371 N 341
G  372 N 342
E  373 H 343
T  374 F 344
E  375 D 345
D  376 I 346
A  377 S 347
T  378 L 348
I  379 A 349
A  380 M 350
D  381 F 351
L  382 T 352
A  383 H 353
V  384 V 354
G  385 A 355
T  386 A 356
A  387 A 357
A  388 A 358
G  389 P 359
Q  390 G 360
I  391 K 361
K  392 I 362
T  393 T 363
G  394 A 364
S  395 I 365
M  396 D 366
S  397 T 367
R  398 H 368
S  399 W 369
D  400 I 370
R  401 W 371
V  402 Q 372
A  403 E 373
K  404 G 374
Y  405 N 375
N  406 Q 376
Q  407 R 377
L  408 L 378
I  409 T 379
R  410 K 380
I  411 E 381
E  412 P 382
E  413 F 383
A  414 E 384
L  415 I 385
G  416 K 386
E  417 G 387
K  418 E 394
A  419 K 395
P  420 P 396
Y  421 G 397
N  422 L 398
G  423 G 399
R  424 K 440
K  425 R 441
E  426 P 442
I  427 C 443
K  428 M 444
G  429 V 445
Q  430 R 446
TER
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