
PFRMAT SS
TARGET T0111
AUTHOR 3878-6624-7634
REMARK -
METHOD Neural networks trained on latest version of pdb
METHOD See:
METHOD Prediction of protein secondary structure at 80 accuracy
METHOD Thomas Nordahl Petersen, Claus Lundegaard, Morten Nielsen,
METHOD Henrik Bohr, Jakob Bohr, Soren Brunak, Garry P. Gippert,
METHOD Ole Lund, Proteins, in press
MODEL 1
S C  1.00
K E  0.67
I E  0.76
V E  0.80
K E  0.89
I E  0.87
I E  0.85
G E  0.80
R E  0.77
E E  0.87
I E  0.86
I E  0.78
D C  0.57
S C  0.90
R C  0.96
G C  0.96
N C  0.90
P C  0.67
T E  0.74
V E  0.94
E E  0.97
A E  0.97
E E  0.97
V E  0.97
H E  0.96
L E  0.61
E C  0.91
G C  0.94
G C  0.93
F C  0.60
V E  0.79
G E  0.73
M E  0.65
A E  0.62
A C  0.49
A C  0.74
P C  0.83
S C  0.84
G C  0.81
A C  0.78
S C  0.72
T C  0.70
G C  0.70
S C  0.60
R C  0.49
E H  0.42
A H  0.41
L H  0.35
E E  0.38
L C  0.55
R C  0.68
D C  0.84
G C  0.96
D C  0.95
K C  0.82
S C  0.72
R C  0.63
F C  0.62
L C  0.66
G C  0.66
K C  0.47
G H  0.68
V H  0.88
T H  0.94
K H  0.95
A H  0.96
V H  0.96
A H  0.95
A H  0.93
V H  0.92
N H  0.90
G H  0.89
P H  0.87
I H  0.85
A H  0.76
Q H  0.89
A H  0.87
L H  0.81
I H  0.61
G C  0.76
K C  0.90
D C  0.95
A H  0.60
K H  0.48
D C  0.65
Q H  0.97
A H  0.98
G H  0.97
I H  0.98
D H  0.98
K H  0.99
I H  0.98
M H  0.97
I H  0.95
D H  0.87
L H  0.57
D C  0.81
G C  0.96
T C  0.94
E C  0.81
N C  0.71
K H  0.57
S H  0.63
K H  0.63
F C  0.53
G C  0.69
A H  0.58
N H  0.79
A H  0.92
I H  0.95
L H  0.96
A H  0.96
V H  0.96
S H  0.96
L H  0.99
A H  0.98
N H  0.97
A H  0.96
K H  0.94
A H  0.92
A H  0.87
A H  0.87
A H  0.81
A H  0.70
K C  0.69
G C  0.97
M C  0.97
P C  0.75
L H  0.82
Y H  0.92
E H  0.95
H H  0.93
I H  0.91
A H  0.88
E H  0.84
L H  0.73
N C  0.51
G C  0.88
T C  0.94
P C  0.92
G C  0.93
K C  0.82
Y C  0.54
S E  0.66
M E  0.54
P C  0.53
V C  0.49
P C  0.51
M E  0.51
M E  0.64
N E  0.66
I E  0.65
I C  0.46
N C  0.76
G C  0.90
G C  0.85
E C  0.74
H C  0.75
A C  0.85
D C  0.91
N C  0.92
N C  0.85
V C  0.73
D C  0.68
I C  0.41
Q E  0.58
E E  0.77
F E  0.84
M E  0.87
I E  0.87
Q E  0.77
P E  0.58
V C  0.69
G C  0.89
A C  0.60
K H  0.63
T H  0.71
V H  0.94
K H  0.95
E H  0.98
A H  0.98
I H  0.98
R H  0.97
M H  0.96
G H  0.94
S H  0.97
E H  0.98
V H  0.99
F H  0.99
H H  0.99
H H  0.99
L H  0.99
A H  0.99
K H  0.99
V H  0.98
L H  0.97
K H  0.94
A H  0.84
K H  0.55
G C  0.85
M C  0.93
N C  0.87
T C  0.79
A C  0.75
V C  0.73
G C  0.76
D C  0.75
E C  0.75
G C  0.81
G C  0.84
Y C  0.80
A C  0.86
P C  0.86
N C  0.87
L C  0.70
G C  0.66
S C  0.68
N H  0.68
A H  0.88
E H  0.93
A H  0.97
L H  0.99
A H  0.99
V H  0.99
I H  0.99
A H  0.99
E H  0.99
A H  0.98
V H  0.97
K H  0.94
A H  0.84
A C  0.55
G C  0.94
Y C  0.92
E C  0.86
L C  0.82
G C  0.90
K C  0.86
D E  0.52
I E  0.85
T E  0.92
L E  0.93
A E  0.82
M E  0.66
D E  0.41
C H  0.43
A H  0.55
A H  0.68
S H  0.67
E H  0.66
F H  0.59
Y H  0.48
K C  0.60
D C  0.91
G C  0.92
K C  0.68
Y E  0.49
V C  0.51
L C  0.66
A C  0.84
G C  0.90
E C  0.90
G C  0.84
N C  0.75
K C  0.64
A C  0.58
F C  0.63
T C  0.90
S H  0.93
E H  0.97
E H  0.98
F H  0.99
T H  0.99
H H  0.99
F H  0.99
L H  0.99
E H  0.98
E H  0.97
L H  0.95
T H  0.88
K H  0.73
Q C  0.56
Y C  0.96
P C  0.95
I E  0.83
V E  0.95
S E  0.92
I E  0.77
E C  0.63
D C  0.91
G C  0.92
L C  0.91
D C  0.92
E H  0.74
S H  0.74
D H  0.78
W H  0.91
D H  0.94
G H  0.96
F H  0.98
A H  0.99
Y H  0.98
Q H  0.97
T H  0.95
K H  0.91
V H  0.84
L H  0.59
G C  0.86
D C  0.95
K C  0.78
I E  0.82
Q E  0.97
L E  0.98
V E  0.92
G E  0.52
D C  0.78
D C  0.69
L C  0.54
F C  0.52
V C  0.58
T C  0.76
N C  0.91
T H  0.91
K H  0.96
I H  0.98
L H  0.98
K H  0.98
E H  0.96
G H  0.94
I H  0.90
E H  0.80
K H  0.56
G C  0.64
I C  0.69
A C  0.74
N C  0.73
S E  0.68
I E  0.83
L E  0.83
I E  0.75
K E  0.59
F C  0.51
N C  0.64
Q C  0.62
I C  0.65
G C  0.68
S C  0.67
L H  0.92
T H  0.95
E H  0.97
T H  0.99
L H  0.99
A H  0.99
A H  0.99
I H  0.99
K H  0.98
M H  0.98
A H  0.96
K H  0.92
D H  0.72
A C  0.80
G C  0.99
Y C  0.93
T E  0.67
A E  0.90
V E  0.94
I E  0.92
S E  0.75
H C  0.55
R C  0.76
S C  0.82
G C  0.89
E C  0.89
T C  0.83
E C  0.68
D C  0.60
A C  0.48
T H  0.58
I H  0.71
A H  0.77
D H  0.83
L H  0.88
A H  0.91
V H  0.90
G H  0.86
T H  0.71
A C  0.52
A C  0.82
G C  0.86
Q C  0.71
I C  0.59
K C  0.64
T C  0.73
G C  0.86
S C  0.89
M C  0.88
S C  0.86
R H  0.58
S H  0.77
D H  0.86
R H  0.90
V H  0.94
A H  0.94
K H  0.95
Y H  0.97
N H  0.96
Q H  0.97
L H  0.98
I H  0.98
R H  0.97
I H  0.98
E H  0.97
E H  0.96
A H  0.90
L H  0.71
G C  0.70
E C  0.77
K C  0.72
A C  0.63
P C  0.43
Y H  0.45
N C  0.51
G C  0.64
R C  0.55
K C  0.56
E C  0.67
I C  0.78
K C  0.94
G C  0.94
Q C  0.95
A C  1.00
END

