
PFRMAT AL
TARGET T0112
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1kev_A
N    5 M 1
L    6 K 2
S    7 G 3
A    8 F 4
V    9 A 5
L   10 M 6
Y   11 L 7
K   12 G 8
Q   13 I 9
N   14 N 10
D   15 K 11
L   16 L 12
R   17 G 13
L   18 W 14
E   19 I 15
Q   20 E 16
R   21 K 17
P   22 E 18
I   23 R 19
P   24 P 20
E   25 V 21
P   26 A 22
K   27 G 23
E   28 S 24
D   29 Y 25
E   30 D 26
V   31 A 27
L   32 I 28
L   33 V 29
Q   34 R 30
M   35 P 31
A   36 L 32
Y   37 A 33
V   38 V 34
G   39 S 35
I   40 P 36
C   41 C 37
G   42 T 38
S   43 S 39
D   44 D 40
V   45 I 41
H   46 H 42
Y   47 T 43
Y   48 V 44
E   49 F 45
H   50 E 46
G   51 G 47
R   52 A 48
I   53 L 49
A   54 G 50
V   58 D 51
K   59 R 52
D   60 K 53
P   61 N 54
M   62 M 55
V   63 I 56
I   64 L 57
G   65 G 58
H   66 H 59
E   67 E 60
A   68 A 61
S   69 V 62
G   70 G 63
T   71 E 64
V   72 V 65
V   73 V 66
K   74 E 67
V   75 V 68
G   76 G 69
K   77 S 70
N   78 E 71
V   79 V 72
K   80 K 73
H   81 D 74
L   82 F 75
K   83 K 76
K   84 P 77
G   85 G 78
D   86 D 79
R   87 R 80
V   88 V 81
A   89 I 82
V   90 V 83
E   91 P 84
P   92 C 85
G   93 T 86
V   94 T 87
P   95 P 88
C   96 D 89
R   97 W 90
R   98 R 91
C   99 S 92
Q  100 L 93
F  101 E 94
C  102 V 95
K  103 Q 96
E  104 A 97
G  105 G 98
K  106 F 99
Y  107 Q 100
N  108 Q 101
L  109 H 102
C  110 S 103
P  111 N 104
D  112 G 105
L  113 M 106
T  114 L 107
F  115 A 108
C  116 G 109
A  117 F 112
T  118 S 113
P  119 N 114
P  120 F 115
D  121 K 116
D  122 D 117
G  123 G 118
N  124 V 119
L  125 F 120
A  126 G 121
R  127 E 122
Y  128 Y 123
Y  129 F 124
V  130 V 126
H  131 N 127
A  132 D 128
A  133 A 129
D  134 D 130
F  135 N 132
C  136 L 133
H  137 A 134
K  138 I 135
L  139 L 136
P  140 P 137
D  141 K 138
N  142 D 139
V  143 M 140
S  144 P 141
L  145 L 142
E  146 E 143
E  147 N 144
G  148 A 145
A  149 V 146
L  150 M 147
L  151 I 148
E  152 D 150
P  153 M 151
L  154 M 152
S  155 T 153
V  156 T 154
G  157 G 155
V  158 F 156
H  159 H 157
A  160 G 158
C  161 A 159
R  162 E 160
R  163 L 161
A  164 A 162
G  165 D 163
V  166 I 164
Q  167 Q 165
L  168 M 166
G  169 G 167
T  170 S 168
T  171 S 169
V  172 V 170
L  173 V 171
V  174 V 172
I  175 I 173
G  176 G 174
A  177 I 175
G  178 G 176
P  179 A 177
I  180 V 178
G  181 G 179
L  182 L 180
V  183 M 181
S  184 G 182
V  185 I 183
L  186 A 184
A  187 G 185
A  188 A 186
K  189 K 187
A  190 L 188
Y  191 R 189
G  192 G 190
A  193 A 191
F  194 R 193
V  195 I 194
V  196 I 195
C  197 G 196
T  198 V 197
A  199 G 198
R  200 S 199
S  201 R 200
P  202 P 201
R  203 I 202
R  204 C 203
L  205 V 204
E  206 E 205
V  207 A 206
A  208 A 207
K  209 K 208
N  210 F 209
C  211 Y 210
G  212 G 211
A  213 A 212
T  216 T 213
L  217 D 214
V  218 I 215
V  219 L 216
D  220 N 217
P  221 Y 218
E  225 K 219
E  226 N 220
S  227 G 221
S  228 H 222
I  229 I 223
I  230 V 224
E  231 D 225
R  232 Q 226
I  233 V 227
R  234 M 228
S  235 K 229
A  236 L 230
I  237 T 231
G  238 N 232
D  239 G 233
L  240 K 234
P  241 V 236
N  242 D 237
V  243 R 238
T  244 V 239
I  245 I 240
D  246 M 241
C  247 A 242
S  248 G 243
G  249 G 244
N  250 G 245
E  251 S 246
K  252 E 247
C  253 T 248
I  254 L 249
T  255 S 250
I  256 Q 251
G  257 A 252
I  258 V 253
N  259 S 254
I  260 M 255
T  261 V 256
R  262 K 257
T  263 P 258
G  264 G 259
G  265 G 260
T  266 I 261
L  267 I 262
M  268 S 263
L  269 N 264
V  270 I 265
G  271 N 266
M  272 Y 267
G  273 S 270
S  274 G 271
Q  275 D 272
M  276 A 273
V  277 L 274
T  278 L 275
V  279 I 276
P  280 P 277
L  281 R 278
V  282 V 279
N  283 E 280
A  284 C 283
C  285 G 284
A  286 M 285
R  287 A 286
E  288 H 287
I  289 K 288
D  290 T 289
I  291 I 290
K  292 K 291
S  293 G 292
V  294 G 293
F  295 L 294
R  296 C 295
Y  297 P 296
C  298 G 297
N  299 G 298
D  300 R 301
Y  301 A 302
P  302 E 303
I  303 M 304
A  304 L 305
L  305 R 306
E  306 D 307
M  307 M 308
V  308 V 309
A  309 V 310
S  310 Y 311
G  311 N 312
R  312 R 313
C  313 V 314
N  314 D 315
V  315 L 316
K  316 S 317
Q  317 K 318
L  318 L 319
V  319 V 320
T  320 T 321
H  321 H 322
S  322 V 323
F  323 Y 324
K  324 G 326
L  325 F 327
E  326 D 328
Q  327 H 329
T  328 I 330
V  329 E 331
D  330 E 332
A  331 A 333
F  332 L 334
E  333 L 335
A  334 L 336
A  335 M 337
R  336 K 338
K  337 D 339
K  338 K 340
A  339 P 341
D  340 K 342
N  341 D 343
T  342 L 344
I  343 I 345
K  344 K 346
V  345 A 347
M  346 V 348
I  347 V 349
S  348 I 350
C  349 L 351
TER
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