
PFRMAT AL
TARGET T0113
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=9.50 
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: Epimerase
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1udc
L  11     M     1
V  12     R     2
A  13     V     3
V  14     L     4
I  15     V     5
T  16     T     6
G  17     G     7
G  18     G     8
A  19     S     9
S  20     G    10
G  21     Y    11
L  22     I    12
G  23     G    13
L  24     S    14
S  25     H    15
T  26     T    16
A  27     C    17
K  28     V    18
R  29     Q    19
L  30     L    20
V  31     L    21
G  32     Q    22
Q  33     N    23
A  35     G    24
T  36     H    25
A  37     D    26
V  38     V    27
L  39     I    28
L  40     I    29
D  41     N    35
V  42     S    36
P  43     K    37
N  44     R    38
S  45     S    39
E  46     V    40
G  47     L    41
E  48     P    42
T  49     V    43
E  50     I    44
A  51     E    45
K  52     R    46
K  53     L    47
L  54     G    48
G  55     G    49
G  56     K    50
N  57     H    51
C  58     P    52
I  59     T    53
F  60     F    54
A  61     V    55
P  62     E    56
A  63     G    57
N  64     D    58
V  65     I    59
T  66     R    60
S  67     N    61
E  68     E    62
K  69     A    63
E  70     L    64
V  71     M    65
Q  72     T    66
A  73     E    67
A  74     I    68
L  75     L    69
T  76     H    70
L  77     D    71
A  78     H    72
R  84     A    73
I  85     I    74
D  86     D    75
V  87     T    76
A  88     V    77
V  89     I    78
N  90     H    79
C  91     F    80
A  92     A    81
G  93     G    82
E 103     L    83
K 104     K    84
K 105     A    85
Q 107     V    86
V 108     G    87
H 109     E    88
T 110     S    89
L 111     V    90
E 112     Q    91
D 113     K    92
F 114     P    93
Q 115     L    94
R 116     E    95
V 117     Y    96
I 118     Y    97
N 119     D    98
V 120     N    99
N 121     N   100
L 122     V   101
I 123     N   102
G 124     G   103
T 125     T   104
F 126     L   105
N 127     R   106
V 128     L   107
I 129     I   108
R 130     S   109
L 131     A   110
V 132     M   111
A 133     R   112
G 134     A   113
V 135     A   114
M 136     N   115
Q 146     V   116
R 147     K   117
G 148     N   118
V 149     F   119
I 150     I   120
I 151     F   121
N 152     S   122
T 153     S   123
A 154     S   124
S 155     A   125
V 156     T   126
A 157     V   127
F 159     G   143
E 160     T   144
G 161     P   145
Q 162     Q   146
A 166     S   147
A 167     P   148
Y 168     Y   149
S 169     G   150
A 170     K   151
S 171     S   152
K 172     K   153
G 173     L   154
G 174     M   155
I 175     V   156
V 176     E   157
G 177     Q   158
M 178     I   159
T 179     L   160
L 180     T   161
P 181     D   162
I 182     L   163
A 183     Q   164
R 184     K   165
D 185     A   166
L 186     Q   167
A 187     P   168
P 188     D   169
I 189     W   170
G 190     S   171
I 191     I   172
R 192     A   173
V 193     L   174
V 194     L   175
T 195     R   176
I 196     Y   177
A 197     F   178
P 198     N   179
G 199     P   180
L 200     Y   203
F 201     I   204
A 202     A   205
T 203     Q   206
P 204     V   207
L 205     A   208
L 206     V   209
T 207     G   210
K 212     R   211
V 213     R   212
R 214     D   213
N 215     S   214
F 216     L   215
L 217     A   216
A 218     I   217
S 219     F   218
Q 220     G   219
V 221     N   220
P 222     D   221
F 223     Y   222
P 224     P   223
S 225     T   224
R 226     E   225
L 227     D   226
G 228     G   227
D 229     T   228
P 230     G   229
A 231     V   230
E 232     R   231
Y 233     D   232
A 234     Y   233
H 235     I   234
L 236     H   235
V 237     V   236
Q 238     M   237
M 239     D   238
V 240     L   239
I 241     A   240
E 242     D   241
N 243     G   242
P 244     H   243
F 245     V   244
L 246     V   245
N 247     A   246
G 248     M   247
E 249     E   248
V 250     K   249
I 251     L   250
R 252     A   251
L 253     N   252
Q 260     K   253
P 261     P   254
TER
END

