
PFRMAT AL
TARGET T0118
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.03 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1mxa_3
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1mxa
M   1     M   236
A   2     G   237
G   3     D   238
Y   4     C   239
G   5     G   240
A   6     L   241
K   7     T   242
G   8     G   243
I   9     R   244
R  10     K   245
K  11     I   246
V  12     I   247
G  13     V   248
A  14     D   249
F  15     T   250
R  16     Y   251
S  17     G   252
G  18     G   253
L  19     M   254
E  20     A   255
D  21     R   256
K  22     H   257
V  23     G   258
S  24     S   268
K  25     K   269
Q  26     V   270
L  27     D   271
E  28     R   272
S  29     S   273
K  30     A   274
G  31     A   275
I  32     Y   276
K  33     A   277
F  34     A   278
E  35     R   279
Y  36     Y   280
E  37     V   281
E  38     A   282
W  39     K   283
K  40     N   284
V  41     I   285
P  42     V   286
Y  43     A   287
V  44     A   288
I  45     G   289
P  46     L   290
A  47     A   291
S  48     D   292
N  49     R   293
H  50     C   294
T  51     E   295
Y  52     I   296
T  53     Q   297
P  54     V   298
D  55     S   299
F  56     Y   300
L  57     A   301
L  58     I   302
P  59     P   307
N  60     T   308
G  61     S   309
I  62     I   310
F  63     M   311
V  64     V   312
E  65     E   313
T  66     T   314
K  67     F   315
G  68     G   316
L  69     T   317
W  70     E   318
E  71     K   319
S  72     V   320
D  73     P   321
D  74     S   322
R  75     E   323
K  76     Q   324
K  77     L   325
H  78     T   326
L  79     L   327
L  80     L   328
I  81     V   329
R  82     R   330
E  83     E   331
Q  84     F   332
H  85     F   333
P  86     D   334
E  87     L   335
L  88     R   336
D  89     P   337
I  90     Y   338
R  91     G   339
I  92     L   340
V  93     I   341
F  94     Q   342
S  95     M   343
S  96     L   344
S  97     D   345
R  98     L   346
T  99     L   347
K 100     H   348
L 101     P   349
Y 102     I   350
K 103     Y   351
G 104     K   352
S 105     E   353
P 106     T   354
T 107     A   355
S 108     A   356
Y 109     Y   357
G 110     G   358
E 111     H   359
F 112     F   360
C 113     G   361
E 114     R   362
K 115     E   363
H 116     H   364
I 125     F   365
P 126     P   366
A 127     W   367
E 128     E   368
K 135     K   369
E 136     T   370
V 137     D   371
P 138     K   372
F 139     A   373
D 140     Q   374
R 141     L   375
L 142     L   376
K 143     R   377
R 144     D   378
K 145     A   379
G 146     A   380
G 147     G   381
K 148     L   382
K 149     K   383
TER
END

