
PFRMAT AL
TARGET T0118
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1p32_A
K    7 M 74
G    8 H 75
I    9 T 76
R   10 D 77
K   11 G 78
V   12 D 79
G   13 K 80
A   14 A 81
F   15 F 82
R   16 V 83
S   17 D 84
G   18 F 85
L   19 L 86
E   20 S 87
D   21 D 88
K   22 E 89
V   23 I 90
S   24 K 91
K   25 K 95
Q   26 I 96
L   27 Q 97
E   28 K 98
S   29 H 99
K   30 K 100
G   31 G 108
I   32 W 109
K   33 E 110
F   34 L 111
E   35 E 112
Y   36 L 113
E   37 N 114
E   38 G 115
W   39 T 116
K   40 E 117
V   41 A 118
P   42 K 119
Y   43 L 120
V   44 V 121
I   45 V 131
P   46 T 132
A   47 F 133
S   48 N 134
N   49 I 135
H   50 N 136
T   51 N 137
Y   52 S 138
T   53 I 139
P   54 P 140
D   55 L 162
F   56 T 163
L   57 S 164
L   58 T 165
P   59 P 166
N   60 N 167
I   62 F 168
F   63 V 169
V   64 V 170
E   65 E 171
T   66 V 172
W   70 I 173
E   71 K 174
S   72 N 175
D   73 D 176
D   74 D 177
R   75 G 178
K   76 K 179
K   77 K 180
H   78 A 181
L   79 L 182
L   80 V 183
I   81 L 184
R   82 E 198
E   83 A 199
Q   84 E 200
H   85 S 201
P   86 D 202
E   87 I 203
L   88 F 204
D   89 S 205
I   90 I 206
R   91 R 207
I   92 E 208
V   93 V 209
F   94 Q 212
S   95 S 213
S   96 T 214
S   97 G 215
R   98 E 216
T   99 S 217
K  100 T 225
L  101 L 226
Y  102 N 227
K  103 T 228
G  104 D 229
S  105 S 230
P  106 L 231
T  107 D 232
S  108 H 238
Y  109 L 239
G  110 M 240
E  111 D 241
F  112 F 242
C  113 L 243
E  114 A 244
K  115 D 245
H  116 R 246
G  117 G 247
I  118 V 248
K  119 T 251
F  120 F 252
A  121 A 253
D  122 D 254
K  123 E 255
L  124 L 256
I  125 V 257
P  126 E 258
A  127 L 259
E  128 S 260
W  129 T 261
I  130 A 262
K  131 L 263
E  132 E 264
P  133 H 265
K  134 Q 266
K  135 E 267
E  136 Y 268
V  137 I 269
P  138 T 270
F  139 F 271
D  140 E 273
R  141 D 274
L  142 L 275
K  143 K 276
R  144 S 277
K  145 K 280
G  146 S 281
G  147 Q 282
TER
END

