
PFRMAT AL
TARGET T0118
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1bs4_A
A    2 S 1
G    3 V 2
Y    4 L 3
G    5 Q 4
A    6 V 5
K    7 L 6
G    8 H 7
I    9 I 8
R   10 P 9
K   11 D 10
V   12 E 11
G   13 R 12
A   14 L 13
F   15 R 14
R   16 K 15
S   17 R 29
G   18 I 30
L   19 V 31
E   20 D 32
D   21 D 33
K   22 M 34
V   23 F 35
S   24 E 36
K   25 T 37
Q   26 M 38
L   27 Y 39
E   28 A 40
S   29 E 41
K   30 E 42
G   31 G 43
I   32 I 44
K   33 G 45
F   34 L 46
E   35 A 47
Y   36 V 51
E   37 D 52
E   38 I 53
W   39 H 54
K   40 Q 55
V   41 R 56
P   42 I 57
Y   43 I 58
V   44 V 59
I   45 I 60
P   46 D 61
A   47 V 62
S   48 S 63
N   49 E 64
H   50 N 65
T   51 R 66
T   53 D 67
P   54 E 68
D   55 R 69
F   56 L 70
L   57 V 71
L   58 L 72
P   59 I 73
N   60 N 74
G   61 P 75
I   62 E 76
F   63 L 77
V   64 L 78
E   65 E 79
T   66 K 80
K   67 S 81
G   68 G 82
E   71 E 83
S   72 T 84
D   73 G 85
D   74 I 86
R   75 E 87
K   76 E 88
K   77 G 89
H   78 C 90
L   79 L 91
L   80 S 92
I   81 I 93
R   82 P 94
E   83 E 95
Q   84 Q 96
H   85 R 97
P   86 P 101
E   87 R 102
L   88 A 103
D   89 E 104
I   90 V 106
R   91 K 107
I   92 I 108
V   93 R 109
F   94 A 110
S   95 L 111
S   96 D 112
S   97 R 113
R   98 D 114
T   99 G 115
K  100 K 116
L  101 P 117
Y  102 F 118
K  103 E 119
G  104 L 120
S  105 E 121
P  106 A 122
T  107 D 123
S  108 G 124
Y  109 L 125
G  110 L 126
E  111 A 127
F  112 I 128
C  113 C 129
E  114 I 130
K  115 Q 131
H  116 H 132
G  117 G 139
I  118 K 140
K  119 L 141
F  120 F 142
A  121 M 143
D  122 D 144
K  123 Y 145
L  124 L 146
I  125 S 147
P  126 P 148
A  127 L 149
E  128 K 150
W  129 Q 151
I  130 Q 152
K  131 R 153
E  132 I 154
P  133 R 155
K  134 Q 156
K  135 K 157
E  136 V 158
V  137 E 159
P  138 K 160
F  139 L 161
D  140 D 162
R  141 R 163
L  142 L 164
K  143 K 165
R  144 A 166
K  145 R 167
G  146 A 168
TER
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