

PFRMAT AL
TARGET T0118
AUTHOR 9885-9936-6780
METHOD Smith-Waterman Alignment alignment of secondary structure
METHOD annotated sequence
MODEL 3
PARENT 1bqq_M
G   13   Q  129
A   14   N  130
F   15   Y  131
R   16   T  132
S   17   P  133
G   18   K  134
L   19   V  135
E   20   G  136
D   21   E  137
K   22   Y  138
V   23   A  139
S   24   T  140
K   25   Y  141
Q   26   E  142
L   27   I  144
E   28   R  145
K   30   K  146
G   31   P  156
I   32   L  157
K   33   R  158
F   34   F  159
E   35   R  160
Y   36   E  161
E   37   V  162
A   47   P  163
S   48   Y  164
N   49   A  165
H   50   Y  166
T   51   I  167
Y   52   R  168
T   53   E  169
P   54   G  170
D   55   H  171
F   56   E  172
L   57   K  173
L   58   Q  174
P   59   A  175
N   60   D  176
G   61   I  177
I   62   M  178
F   63   I  179
V   64   F  180
E   65   F  181
T   66   A  182
K   67   E  183
G   68   G  184
L   69   F  185
W   70   H  186
E   71   D  188
S   72   S  189
D   73   D  193
D   74   G  194
R   75   E  195
K   76   G  196
K   77   G  197
H   78   F  198
L   79   L  199
L   80   A  200
I   81   H  201
R   82   A  202
E   83   Y  203
Q   84   P  205
H   85   G  206
P   86   P  207
E   87   N  208
L   88   I  209
D   89   D  212
I   90   T  213
V   93   H  214
F   94   F  215
S   95   D  216
S   96   S  217
S   97   A  218
R   98   E  219
T   99   P  220
K  100   W  221
L  101   V  223
Y  102   R  224
K  103   N  225
G  104   E  226
S  105   D  227
P  106   L  228
T  107   N  229
S  108   G  230
Y  109   N  231
G  110   D  232
E  111   I  233
F  112   F  234
C  113   L  235
E  114   V  236
G  117   A  237
I  118   V  238
K  119   H  239
F  120   E  240
A  121   L  241
D  122   G  242
K  123   H  243
L  124   A  244
I  125   L  245
P  126   G  246
A  127   L  247
E  128   E  248
W  129   H  249
I  130   S  250
K  131   S  251
E  132   D  252
P  133   P  253
K  134   S  254
K  135   A  255
E  136   I  256
V  137   M  257
P  138   P  259
F  139   F  260
D  140   Y  261
R  141   Q  262
L  142   W  263
K  143   M  264
R  144   D  265
K  145   T  266
G  146   E  267
G  147   N  268
K  148   F  269
K  149   V  270
TER
END
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Ajay K. Royyuru, PhD                   Phone: (914) 945-1335
Manager, Structural Biology            Fax: (914) 945-4104
Computational Biology Center          mailto:ajayr@us.ibm.com
IBM Research                                 --- IBM Internal ---
T. J. Watson Research Center           Phone: T/L 862-1335
P.O. Box 218, Route 134                  Fax: T/L 862-4104
Yorktown Heights, NY 10598            Office: 13-106D


