
PFRMAT AL
TARGET T0120
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1cun_A
S   92 M 7
C   93 V 8
Y   94 H 9
F   95 Q 10
F   96 F 11
F   97 F 12
E   98 R 13
K   99 D 14
N  100 M 15
L  101 D 16
K  102 D 17
D  103 E 18
V  104 E 19
S  105 S 20
F  106 W 21
R  107 I 22
L  108 K 23
G  109 E 24
S  110 K 25
F  111 K 26
N  112 L 27
L  113 L 28
E  114 V 29
K  115 S 30
V  116 S 31
E  117 E 32
N  118 D 33
P  119 Y 34
A  120 G 35
E  121 R 36
V  122 D 37
I  123 L 38
R  124 R 45
E  125 K 46
L  126 K 47
I  127 H 48
C  128 K 49
Y  129 R 50
C  130 L 51
L  131 E 52
D  132 A 53
T  133 E 54
I  134 L 55
A  135 A 56
E  136 A 57
N  137 H 58
Q  138 E 59
A  139 P 60
K  140 A 61
N  141 I 62
E  142 Q 63
H  143 S 64
L  144 V 65
Q  145 L 66
K  146 D 67
E  147 T 68
N  148 G 69
E  149 K 70
R  150 K 71
L  151 L 72
L  152 S 73
R  153 D 74
D  154 D 75
W  155 K 80
N  156 E 81
D  157 E 82
V  158 I 83
Q  159 Q 84
G  160 Q 85
R  161 R 86
F  162 L 87
E  163 A 88
K  164 Q 89
C  165 F 90
V  166 V 91
S  167 D 92
A  168 H 93
K  169 W 94
E  170 K 95
A  171 E 96
L  172 L 97
E  173 K 98
T  174 Q 99
D  175 L 100
L  176 A 101
Y  177 A 102
K  178 A 103
R  179 R 104
F  180 G 105
I  181 Q 106
L  182 R 107
V  183 L 108
L  184 E 109
N  185 E 110
E  186 S 111
K  187 L 112
K  188 E 113
T  189 Y 114
K  190 Q 115
I  191 Q 116
R  192 F 117
S  193 V 118
L  194 A 119
H  195 N 120
N  196 V 121
K  197 E 122
L  198 E 123
L  199 E 124
N  200 E 125
A  201 A 126
A  202 I 128
Q  203 N 129
E  204 E 130
R  205 K 131
E  206 M 132
K  207 T 133
D  208 L 134
I  209 V 135
K  210 A 136
Q  211 S 137
E  212 E 138
G  213 G 141
E  214 D 142
T  215 T 143
A  216 L 144
I  217 A 145
C  218 A 146
S  219 I 147
E  220 Q 148
M  221 G 149
T  222 L 150
A  223 L 151
D  224 K 152
R  225 K 153
S  237 H 154
E  238 E 155
N  239 A 156
Q  240 F 157
T  241 E 158
D  242 T 159
L  243 D 160
S  244 F 161
G  245 T 162
L  246 V 163
A  247 H 164
S  248 K 165
A  249 D 166
A  250 R 167
V  251 V 168
S  252 N 169
K  253 D 170
D  254 G 175
D  255 E 176
S  256 D 177
I  257 L 178
I  258 I 179
S  259 K 180
S  260 K 181
L  261 N 182
D  262 N 183
V  263 H 184
T  264 H 185
D  265 V 186
I  266 E 187
A  267 N 188
P  268 I 189
S  269 T 190
R  270 A 191
K  271 K 192
R  272 M 193
R  273 K 194
Q  274 G 195
R  275 L 196
M  276 K 197
Q  277 G 198
R  278 K 199
N  279 V 200
L  280 S 201
G  281 D 202
T  282 L 203
E  283 E 204
P  284 K 205
K  285 A 206
M  286 A 207
A  287 A 208
P  288 Q 209
Q  289 R 210
E  290 K 211
N  291 A 212
Q  292 K 213
L  293 L 214
Q  294 D 215
E  295 E 216
K  296 N 217
E  297 S 218
N  298 A 219
TER
END

