
PFRMAT AL
TARGET T0120
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1BG1_A
REMARK DATE	1999-01-20
REMARK SCORE	?
A 135 V 136
E 136 V 137
N 137 T 138
Q 138 E 139
A 139 K 140
K 140 Q 141
N 141 Q 142
E 142 M 143
H 143 L 144
L 144 E 145
Q 145 Q 146
K 146 H 147
E 147 L 148
N 148 Q 149
E 149 D 150
R 150 V 151
L 151 R 152
L 152 K 153
R 153 R 154
D 154 V 155
W 155 Q 156
N 156 D 157
D 157 L 158
V 158 E 159
Q 159 Q 160
G 160 K 161
R 161 M 162
F 162 K 163
E 163 V 164
K 164 V 165
C 165 E 166
V 166 N 167
S 167 L 168
A 168 Q 169
K 169 D 170
E 170 D 171
A 171 F 172
L 172 D 173
E 173 F 174
T 174 N 175
D 175 Y 176
L 176 K 177
Y 177 T 178
K 178 L 179
R 179 K 180
F 180 S 181
I 181 Q 182
L 182 G 183
V 183 D 184
S 193 S 194
L 194 V 195
H 195 T 196
N 196 R 197
K 197 K 199
L 198 M 200
L 199 Q 201
N 200 Q 202
A 201 L 203
A 202 E 204
Q 203 Q 205
E 204 M 206
R 205 L 207
E 206 T 208
K 207 A 209
D 208 L 210
I 209 D 211
K 210 Q 212
Q 211 M 213
E 212 R 214
G 213 R 215
E 214 S 216
T 215 I 217
A 216 V 218
I 217 S 219
C 218 E 220
S 219 L 221
E 220 A 222
M 221 G 223
T 222 L 224
A 223 L 225
D 224 S 226
R 225 A 227
D 226 M 228
P 227 E 229
V 228 Y 230
Y 229 V 231
D 230 Q 232
E 231 K 233
S 232 T 234
T 233 L 235
D 234 T 236
E 235 D 237
E 236 E 238
TER
END

