
PFRMAT AL
TARGET T0120
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1c1g_A
D   57 M 1
D   58 D 2
M   59 A 3
A   60 I 4
M   61 K 5
E   62 K 6
K   63 K 7
G   64 M 8
K   65 Q 9
Y   66 M 10
V   67 L 11
G   68 K 12
E   69 L 13
L   70 D 14
R   71 K 15
K   72 E 16
A   73 N 17
L   74 A 18
L   75 L 19
S   76 D 20
G   77 R 21
A   78 A 22
G   79 D 23
P   80 E 24
A   81 A 25
D   82 E 26
F   96 A 27
F   97 D 28
E   98 K 29
K   99 K 30
N  100 A 31
L  101 A 32
K  102 E 33
D  103 D 34
V  104 R 35
S  105 S 36
F  106 K 37
R  107 Q 38
L  108 L 39
G  109 E 40
S  110 D 41
N  112 E 42
L  113 L 43
E  114 V 44
K  115 S 45
V  116 L 46
E  117 Q 47
N  118 K 48
P  119 K 49
A  120 L 50
E  121 K 51
V  122 A 52
I  123 T 53
R  124 E 54
E  125 E 56
L  126 L 57
I  127 D 58
C  128 K 59
Y  129 Y 60
L  131 S 61
D  132 E 62
T  133 A 63
I  134 L 64
A  135 K 65
E  136 D 66
N  137 A 67
Q  138 Q 68
A  139 E 69
K  140 K 70
N  141 L 71
E  142 E 72
H  143 L 73
L  144 A 74
Q  145 E 75
K  146 K 76
E  147 K 77
N  148 A 78
E  149 T 79
R  150 D 80
L  151 A 81
L  152 E 82
R  153 A 83
D  154 D 84
W  155 V 85
N  156 A 86
D  157 S 87
V  158 L 88
Q  159 N 89
G  160 R 90
R  161 R 91
F  162 E 96
E  163 E 97
K  164 E 98
C  165 L 99
V  166 D 100
S  167 R 101
A  168 A 102
K  169 Q 103
E  170 E 104
A  171 R 105
L  172 L 106
E  173 A 107
T  174 T 108
D  175 A 109
L  176 L 110
Y  177 Q 111
K  178 K 112
R  179 L 113
F  180 E 114
I  181 E 115
L  182 A 116
V  183 E 117
L  184 A 120
N  185 D 121
E  186 E 122
K  187 S 123
K  188 E 124
T  189 R 125
K  190 G 126
I  191 M 127
R  192 K 128
S  193 Q 135
L  194 K 136
H  195 D 137
N  196 E 138
K  197 E 139
L  198 K 140
L  199 M 141
N  200 E 142
A  201 I 143
A  202 Q 144
Q  203 E 145
E  204 I 146
R  205 Q 147
E  206 L 148
K  207 K 149
D  208 E 150
I  209 A 151
K  210 K 152
Q  211 H 153
E  212 I 154
G  213 A 155
E  214 E 156
T  215 D 157
A  216 A 158
I  217 D 159
C  218 R 160
S  219 K 161
E  220 Y 162
M  221 E 163
T  222 E 164
A  223 V 165
D  224 A 166
R  225 R 167
D  226 K 168
P  227 L 169
V  228 V 170
Y  229 I 171
D  230 I 172
E  231 E 173
S  232 S 174
T  233 D 175
D  234 L 176
E  235 E 177
E  236 R 178
S  237 A 179
E  238 E 180
N  239 E 181
Q  240 R 182
T  241 A 183
D  242 E 184
L  243 L 185
S  244 E 187
G  245 G 188
L  246 K 189
A  247 C 190
S  248 A 191
A  249 E 192
A  250 L 193
V  251 E 194
S  252 E 195
K  253 E 196
D  254 I 197
D  255 K 198
S  256 T 199
I  257 V 200
I  258 T 201
S  259 N 202
S  260 N 203
L  261 L 204
D  262 K 205
V  263 S 206
T  264 L 207
D  265 E 208
I  266 A 209
A  267 Q 210
P  268 A 211
S  269 E 212
R  270 K 213
K  271 K 217
R  272 E 218
R  273 D 219
Q  274 K 220
R  275 Y 221
M  276 E 222
Q  277 E 223
R  278 E 224
N  279 I 225
L  280 K 226
G  281 V 227
T  282 L 228
E  283 S 229
P  284 D 230
K  285 K 231
M  286 L 232
A  287 K 233
P  288 E 234
Q  289 A 235
E  290 E 236
N  291 T 237
Q  292 R 238
L  293 A 239
Q  294 E 240
E  295 F 241
K  296 A 242
E  297 E 243
N  298 R 244
S  299 S 245
R  300 V 246
P  301 T 247
D  302 K 248
S  303 L 249
S  304 E 250
L  305 K 251
P  306 S 252
E  307 I 253
T  308 D 254
S  309 D 255
K  310 L 256
K  311 E 257
E  312 D 258
H  313 E 259
I  314 L 260
S  315 Y 261
A  316 A 262
E  317 Q 263
N  318 K 264
M  319 L 265
S  320 K 266
L  321 Y 267
E  322 K 268
T  323 A 269
L  324 I 270
R  325 S 271
N  326 E 272
S  327 E 273
S  328 L 274
P  329 D 275
E  330 H 276
D  331 A 277
L  332 L 278
F  333 N 279
D  334 D 280
E  335 S 283
I  336 I 284
TER
END

