
PFRMAT AL
TARGET T0121
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1B0U_A
REMARK DATE	1999-11-21
REMARK SCORE	?
G 3 K 6
V 4 L 7
R 5 H 8
L 6 V 9
V 7 I 10
D 8 D 11
V 9 L 12
W 10 H 13
K 11 K 14
V 12 R 15
F 13 Y 16
G 14 G 17
E 15 G 18
V 16 H 19
T 17 E 20
A 18 V 21
V 19 L 22
R 20 K 23
E 21 G 24
L 22 V 25
S 23 S 26
L 24 L 27
E 25 Q 28
V 26 A 29
K 27 R 30
D 28 A 31
G 29 G 32
E 30 D 33
F 31 V 34
M 32 I 35
I 33 S 36
L 34 I 37
L 35 I 38
G 36 G 39
P 37 S 40
S 38 S 41
G 39 G 42
C 40 S 43
G 41 G 44
K 42 K 45
T 43 S 46
T 44 T 47
T 45 F 48
L 46 L 49
R 47 R 50
M 48 C 51
I 49 I 52
A 50 N 53
G 51 F 54
L 52 L 55
E 53 E 56
E 54 K 57
P 55 P 58
S 56 S 59
R 57 E 60
G 58 G 61
Q 59 A 62
I 60 I 63
Y 61 I 64
I 62 V 65
G 63 N 66
D 64 G 67
R 65 Q 68
L 66 N 69
V 67 I 70
A 68 N 71
D 69 L 72
P 70 V 73
E 71 R 74
K 72 D 75
G 73 K 76
I 74 D 77
F 75 L 88
V 76 R 89
P 77 L 90
P 78 L 91
K 79 R 92
D 80 T 93
R 81 R 94
D 82 L 95
I 83 T 96
A 84 M 97
M 85 V 98
V 86 F 99
F 87 Q 100
Q 88 H 101
S 89 F 102
Y 90 N 103
A 91 L 104
L 92 W 105
Y 93 S 106
P 94 H 107
H 95 M 108
M 96 T 109
T 97 V 110
V 98 L 111
Y 99 E 112
D 100 N 113
N 101 V 114
I 102 M 115
A 103 E 116
F 104 A 117
P 105 I 119
L 106 Q 120
K 107 V 121
L 108 L 122
R 109 G 123
K 110 L 124
V 111 S 125
P 112 K 126
R 113 H 127
Q 114 D 128
E 115 A 129
I 116 R 130
D 117 E 131
Q 118 R 132
R 119 A 133
V 120 L 134
R 121 K 135
E 122 Y 136
V 123 L 137
A 124 A 138
E 125 K 139
L 126 V 140
L 127 G 141
G 128 I 142
L 129 D 143
T 130 E 144
E 131 A 146
L 132 Q 147
L 133 G 148
N 134 K 149
R 135 Y 150
K 136 P 151
P 137 V 152
R 138 H 153
E 139 L 154
L 140 S 155
S 141 G 156
G 142 G 157
G 143 Q 158
Q 144 Q 159
R 145 Q 160
Q 146 R 161
R 147 V 162
V 148 S 163
A 149 I 164
L 150 A 165
G 151 R 166
R 152 A 167
A 153 L 168
I 154 A 169
V 155 M 170
R 156 E 171
K 157 P 172
P 158 D 173
Q 159 V 174
V 160 L 175
F 161 L 176
L 162 F 177
M 163 D 178
D 164 E 179
E 165 P 180
P 166 T 181
L 167 S 182
S 168 A 183
N 169 L 184
L 170 D 185
D 171 P 186
A 172 E 187
K 173 L 188
L 174 V 189
R 175 G 190
V 176 E 191
R 177 V 192
M 178 L 193
R 179 R 194
A 180 I 195
E 181 M 196
L 182 Q 197
K 183 Q 198
K 184 L 199
L 185 A 200
Q 186 E 201
R 187 E 202
Q 188 G 203
L 189 K 204
G 190 T 205
V 191 M 206
T 192 V 207
T 193 V 208
I 194 V 209
Y 195 T 210
V 196 H 211
T 197 E 212
H 198 M 213
D 199 G 214
Q 200 F 215
V 201 A 216
E 202 R 217
A 203 H 218
M 204 V 219
T 205 S 220
M 206 S 221
G 207 H 222
D 208 V 223
R 209 I 224
I 210 F 225
A 211 L 226
V 212 H 227
M 213 Q 228
N 214 G 229
R 215 K 230
G 216 I 231
V 217 E 232
L 218 E 233
Q 219 E 234
Q 220 G 235
V 221 D 236
G 222 P 237
S 223 E 238
P 224 Q 239
D 225 V 240
E 226 F 241
V 227 G 242
Y 228 N 243
D 229 P 244
K 230 Q 245
P 231 S 246
A 232 P 247
N 233 R 248
T 234 L 249
F 235 Q 250
V 236 Q 251
A 237 F 252
G 238 L 253
F 239 K 254
I 240 G 255
G 241 S 256
S 242 L 257
P 243 K 258
P 244 K 259
M 245 L 260
TER
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