
PFRMAT AL
TARGET T0123
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=25.45
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: lipocalin
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1beb_A
P   5     Q     5 
I   6     T     6 
M   7     M     7 
T   8     K     8 
E   9     G     9 
L  10     L    10 
D  11     D    11 
T  12     I    12 
Q  13     Q    13 
K  14     K    14 
V  15     V    15 
A  16     A    16 
G  17     G    17 
T  18     T    18 
W  19     W    19 
H  20     Y    20 
T  21     S    21 
V  22     L    22 
A  23     A    23 
M  24     M    24 
A  25     A    25 
V  26     A    26 
S  27     S    27 
D  28     D    28 
V  29     I    29 
S  30     S    30 
L  31     L    31 
L  32     L    32 
D  33     D    33 
A  34     A    34 
K  35     Q    35 
S  36     S    36 
S  37     A    37 
P  38     P    38 
L  39     L    39 
K  40     R    40 
A  41     V    41 
Y  42     Y    42 
V  43     V    43 
E  44     E    44 
G  45     E    45 
L  46     L    46 
K  47     K    47 
P  48     P    48 
T  49     T    49 
P  50     P    50 
G  52     G    52 
D  53     D    53 
L  54     L    54 
E  55     E    55 
I  56     I    56 
L  57     L    57 
L  58     L    58 
Q  59     Q    59 
K  60     K    60 
R  61     W    61 
E  62     E    62 
N  63     N    63 
D  64     G    64 
K  65     E    65 
C  66     C    66 
A  67     A    67 
Q  68     Q    68 
E  69     K    69 
V  70     K    70 
L  71     I    71 
L  72     I    72 
A  73     A    73 
K  74     E    74 
K  75     K    75 
T  76     T    76 
D  77     K    77 
P  79     P    79 
A  80     A    80 
V  81     V    81 
F  82     F    82 
K  83     K    83 
I  84     I    84 
N  85     D    85 
A  86     A    86 
L  87     L    87 
D  88     N    88 
E  89     E    89 
N  90     N    90 
Q  91     K    91 
L  92     V    92 
F  93     L    93 
L  94     V    94 
L  95     L    95 
D  96     D    96 
T  97     T    97 
D  98     D    98 
Y  99     Y    99 
D 100     K   100 
S 101     K   101 
H 102     Y   102 
L 103     L   103 
L 104     L   104 
L 105     F   105 
C 106     C   106 
M 107     M   107 
E 108     E   108 
N 109     N   109 
S 110     S   110 
A 111     A   111 
S 112     E   112 
P 113     P   113 
E 114     E   114 
S 116     S   116 
L 117     L   117 
V 118     V   118 
C 119     C   119 
Q 120     Q   120 
S 121     C   121 
L 122     L   122 
A 123     V   123 
R 124     R   124 
T 125     T   125 
L 126     P   126 
E 127     E   127 
V 128     D   129 
D 130     D   130 
Q 131     E   131 
I 132     A   132 
R 133     L   133 
E 134     E   134 
K 135     K   135 
F 136     F   136 
E 137     D   137 
D 138     K   138 
A 139     A   139 
L 140     L   140 
K 141     K   141 
T 142     A   142 
L 143     M   145 
M 147     H   146 
R 148     I   147 
I 149     R   148 
L 150     L   149 
P 151     S   150 
A 152     F   151 
Q 153     N   152 
L 154     P   153 
E 155     T   154 
E 156     Q   155 
Q 157     L   156 
C 158     E   157 
R 159     E   158 
V 160     Q   159 
TER
END

