
PFRMAT AL
TARGET T0123
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.41 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1bgp
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1bgp
V   1     V   144 
E   2     L   145 
V   3     S   146 
T   4     D   147 
P   5     L   148 
I   6     P   149 
M   7     G   150 
T   8     P   151 
E   9     S   152 
L  10     S   153 
D  11     N   154 
T  12     V   155 
Q  13     Q   156 
K  14     S   157 
V  15     L   158 
A  16     L   159 
G  17     A   160 
T  18     L   161 
W  19     L   162 
H  20     G   163 
T  21     R   164 
V  22     L   165 
A  23     G   166 
M  24     L   167 
A  25     D   168 
V  26     A   169 
S  27     T   170 
D  28     D   171 
V  29     L   172 
S  30     V   173 
L  31     T   174 
L  32     I   175 
D  33     S   176 
A  34     G   177 
K  35     G   178 
S  36     H   179 
S  37     A   184 
P  38     H   185 
L  39     C   186 
K  40     S   187 
A  41     S   188 
Y  42     F   189 
V  43     E   190 
E  44     D   191 
G  45     R   192 
L  46     L   193 
K  47     F   194 
P  48     P   195 
T  49     R   196 
P  50     P   197 
E  51     D   198 
G  52     P   199 
D  53     T   200 
L  54     I   201 
E  55     S   202 
I  56     P   203 
L  57     T   204 
L  58     F   205 
Q  59     L   206 
K  60     S   207 
R  61     R   208 
E  62     L   209 
N  63     K   210 
D  64     R   211 
K  65     T   212 
C  66     C   213 
A  67     P   214 
Q  68     A   215 
E  69     K   216 
V  70     G   217 
L  71     T   218 
L  72     D   219 
A  73     R   220 
K  74     R   221 
K  75     T   222 
T  76     V   226 
D  77     R   227 
I  78     T   228 
P  79     P   229 
A  80     N   230 
V  81     V   231 
F  82     F   232 
E  89     D   233 
N  90     N   234 
Q  91     K   235 
L  92     Y   236 
F  93     Y   237 
L  94     I   238 
L  95     D   239 
D  96     L   240 
T  97     V   241 
D  98     N   242 
Y  99     R   243 
D 100     E   244 
S 101     G   245 
H 102     L   246 
L 103     F   247 
L 104     V   248 
L 105     S   249 
C 106     D   250 
M 107     Q   251 
E 108     D   252 
N 109     L   253 
S 110     F   254 
A 111     T   255 
S 112     N   256 
P 113     A   257 
E 114     I   258 
H 115     T   259 
S 116     R   260 
L 117     P   261 
V 118     I   262 
C 119     V   263 
Q 120     E   264 
S 121     R   265 
L 122     F   266 
A 123     A   267 
R 124     Q   268 
T 125     S   269 
D 129     Q   270 
D 130     Q   271 
Q 131     D   272 
I 132     F   273 
R 133     F   274 
E 134     E   275 
K 135     Q   276 
F 136     F   277 
E 137     G   278 
D 138     V   279 
A 139     S   280 
L 140     I   281 
K 141     G   282 
T 142     K   283 
L 143     M   284 
S 144     G   285 
V 145     Q   286 
P 146     M   287 
M 147     R   288 
R 148     V   289 
I 149     R   290 
L 150     T   291 
P 151     S   292 
A 152     D   293 
Q 153     Q   294 
L 154     G   295 
E 155     E   296 
E 156     R   299 
Q 157     N   300 
C 158     C   301 
R 159     S   302 
V 160     V   303 
TER
END

