
PFRMAT AL
TARGET T0123
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.31 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1pls
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1pls
V  22     M     1 
A  23     E     2 
M  24     P     3 
A  25     K     4 
V  26     R     5 
S  27     I     6 
D  28     R     7 
V  29     E     8 
S  30     G     9 
L  31     Y    10 
L  32     L    11 
D  33     V    12 
A  34     K    13 
K  35     K    14 
S  36     G    15 
S  37     S    16 
P  38     V    17 
L  39     F    18 
K  40     N    19 
A  41     T    20 
Y  42     W    21 
V  43     K    22 
E  44     P    23 
G  45     M    24 
L  46     W    25 
K  47     V    26 
P  48     V    27 
T  49     L    28 
P  50     L    29 
E  51     E    30 
G  52     D    31 
D  53     G    32 
L  54     I    33 
E  55     E    34 
I  56     F    35 
L  57     Y    36 
L  58     K    37 
Q  59     K    38 
K  60     K    39 
R  61     S    40 
E  62     D    41 
N  63     N    42 
D  64     S    43 
K  65     P    44 
C  66     K    45 
A  67     G    46 
Q  68     M    47 
E  69     I    48 
V  70     P    49 
L  71     L    50 
L  72     K    51 
A  73     G    52 
K  74     S    53 
K  75     T    54 
T  76     L    55 
D  77     T    56 
I  78     S    57 
P  79     P    58 
A  80     C    59 
V  81     Q    60 
N  85     D    61 
A  86     F    62 
L  87     G    63 
D  88     K    64 
E  89     R    65 
N  90     M    66 
Q  91     F    67 
L  92     V    68 
F  93     F    69 
L  94     K    70 
L  95     I    71 
D  96     T    72 
T  97     T    73 
D  98     T    74 
Y  99     K    75 
D 100     Q    76 
S 101     Q    77 
H 102     D    78 
L 103     H    79 
L 104     F    80 
L 105     F    81 
C 106     Q    82 
A 123     A    83 
R 124     A    84 
T 125     F    85 
L 126     L    86 
E 127     E    87 
V 128     E    88 
D 129     R    89 
D 130     D    90 
Q 131     A    91 
I 132     W    92 
R 133     V    93 
E 134     R    94 
K 135     D    95 
F 136     I    96 
E 137     N    97 
D 138     K    98 
A 139     A    99 
L 140     I   100 
K 141     K   101 
T 142     C   102 
L 143     I   103 
S 144     E   104 
V 145     G   105 
P 146     L   106 
M 147     E   107 
R 148     H   108 
I 149     H   109 
L 150     H   110 
P 151     H   111 
A 152     H   112 
Q 153     H   113 
TER
END

