
PFRMAT AL
TARGET T0123
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1DF3_A
REMARK DATE	2000-05-10
REMARK SCORE	?
E 2 E 2
V 3 A 3
T 4 S 4
P 5 S 5
I 6 T 6
M 7 G 7
T 8 R 8
E 9 N 9
L 10 F 10
D 11 N 11
T 12 V 12
Q 13 E 13
K 14 K 14
V 15 I 15
A 16 N 16
G 17 G 17
T 18 E 18
W 19 W 19
H 20 H 20
T 21 T 21
V 22 I 22
A 23 I 23
M 24 L 24
A 25 A 25
V 26 S 26
S 27 D 27
D 28 K 28
V 29 R 29
S 30 E 30
L 31 K 31
L 32 I 32
D 33 E 33
A 34 D 34
K 35 N 35
S 36 G 36
S 37 N 37
P 38 F 38
L 39 R 39
K 40 L 40
A 41 F 41
Y 42 L 42
V 43 E 43
E 44 Q 44
G 45 I 45
L 46 H 46
K 47 V 47
P 48 L 48
T 49 E 49
P 50 K 50
E 51 S 51
G 52 L 52
D 53 V 53
L 54 L 54
E 55 K 55
I 56 F 56
L 57 H 57
L 58 T 58
Q 59 V 59
K 60 R 60
R 61 D 61
E 62 E 62
N 63 E 63
D 64 C 64
K 65 S 65
C 66 E 66
A 67 L 67
Q 68 S 68
E 69 M 69
V 70 V 70
L 71 A 71
L 72 D 72
A 73 K 73
K 74 T 74
K 75 E 75
T 76 K 76
D 77 A 77
I 78 G 78
P 79 E 79
A 80 Y 80
V 81 S 81
F 82 V 82
K 83 T 83
I 84 Y 84
N 85 D 85
A 86 G 86
L 87 F 87
D 88 N 88
E 89 T 89
N 90 F 90
Q 91 T 91
L 92 I 92
F 93 P 93
L 94 K 94
L 95 T 95
D 96 D 96
T 97 Y 97
D 98 D 98
Y 99 N 99
D 100 F 100
S 101 L 101
H 102 M 102
L 103 A 103
L 104 H 104
L 105 L 105
C 106 I 106
M 107 N 107
E 108 E 108
N 109 K 109
S 110 D 110
A 111 G 111
S 112 E 112
P 113 T 113
E 114 F 114
H 115 Q 115
S 116 L 116
L 117 M 117
V 118 G 118
C 119 L 119
Q 120 Y 120
S 121 G 121
L 122 R 122
A 123 E 123
R 124 P 124
T 125 D 125
L 126 L 126
E 127 S 127
V 128 S 128
D 129 D 129
D 130 I 130
Q 131 K 131
I 132 E 132
R 133 R 133
E 134 F 134
K 135 A 135
F 136 Q 136
E 137 L 137
D 138 C 138
A 139 E 139
L 140 E 140
K 141 H 141
T 142 G 142
L 143 I 143
S 144 L 144
V 145 E 146
P 146 N 147
M 147 I 148
R 148 I 149
I 149 D 150
L 150 L 151
P 151 S 152
A 152 N 153
Q 153 A 154
L 154 N 155
E 155 R 156
E 156 C 157
Q 157 L 158
TER
END

