
PFRMAT AL
TARGET T0124
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=4.19 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1sig
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1sig
N  880        Y   137
M  881        P   138
K  882        E   139
E  883        A   140
V  884        I   141
T  885        T   142
Q  886        Y   143
L  887        L   144
P  888        L   145
E  889        E   146
P  890        Q   147
Q  891        Y   148
T  892        N   149
A  893        R   150
S  894        V   151
L  895        E   152
A  896        A   153
E  897        E   154
L  898        E   155
Q  899        A   156
Q  900        R   157
M  901        L   158
K  902        S   159
L  903        D   160
F  904        L   161
L  905        I   162
K  906        T   163
L  907        G   164
L  908        F   165
K  909        V   166
K  910        D   167
Q  911        D   173
E  912        L   174
K  913        E   188
E  914        D   189
L  915        L   190
K  916        D   191
E  917        I   212
L  918        D   213
E  919        P   214
R  920        E   215
K  921        L   216
G  922        A   217
S  923        R   218
K  924        E   219
R  925        K   220
R  926        F   221
E  927        A   222
E  928        E   223
L  929        L   224
L  930        R   225
Q  931        A   226
K  932        Q   227
Y  933        Y   228
S  934        V   229
V  935        V   230
L  936        T   231
F  937        R   232
L  938        D   233
E  939        T   234
P  940        I   235
V  941        K   236
Y  942        A   237
P  943        H   242
R  944        A   243
G  945        T   244
L  979        A   245
D  980        Q   246
S  981        E   247
Q  982        E   248
V  983        I   249
V  984        L   250
E  985        K   251
L  986        L   252
K  987        S   253
E  988        E   254
R  989        V   255
L  990        F   256
E  991        P   263
M  992        K   264
E  993        Q   265
L  994        F   266
I  995        D   267
H  996        Y   268
L  997        L   269
G  998        V   270
E  999        N   271
E 1000        S   272
Y 1001        M   273
H 1002        R   274
D 1003        V   275
G 1004        M   276
I 1005        M   277
R 1006        D   278
R 1007        R   279
R 1008        V   280
K 1009        R   281
E 1010        T   282
Q 1011        Q   283
H 1012        E   284
A 1013        R   285
T 1014        L   286
E 1015        I   287
Q 1016        M   288
T 1017        K   289
A 1018        L   290
K 1019        C   291
I 1020        V   292
T 1021        E   293
E 1022        Q   294
L 1023        C   295
A 1024        K   296
R 1025        M   297
E 1026        K   299
K 1027        K   300
Q 1028        N   301
I 1029        F   302
A 1030        I   303
E 1031        T   304
L 1032        L   305
K 1033         F   306
A 1034         T   307
L 1035         G   308
K 1036         N   309
E 1037         E   310
S 1038         T   311
S 1039         S   312
E 1040         D   313
S 1041         T   314
N 1042         W   315
I 1043         F   316
K 1044         N   317
D 1045         A   318
I 1046         A   319
K 1047         I   320
K 1048         A   321
K 1049         K   324
L 1050         P   325
E 1051         W   326
A 1052         S   327
K 1053         E   328
R 1054         K   329
L 1055         L   330
D 1056         H   331
R 1057         D   332
I 1058         V   333
Q 1059         S   334
V 1060         E   335
M 1061         E   336
M 1062         V   337
R 1063         H   338
S 1064         R   339
T 1065         A   340
S 1066         L   341
D 1067         Q   342
K 1068         K   343
A 1069         L   344
A 1070         Q   345
Q 1071         Q   346
E 1072         I   347
R 1073         E   348
L 1074         E   349
K 1075         E   350
K 1076         T   351
E 1077         G   352
I 1078         L   353
N 1079         T   354
N 1080         I   355
S 1081         E   356
H 1082         Q   357
I 1083         V   358
Q 1084         K   359
E 1085         D   360
V 1086         I   361
V 1087         N   362
Q 1088         R   363
T 1089         R   364
I 1090         M   365
K 1091         S   366
L 1092         I   367
L 1093         G   368
T 1094         E   369
E 1095         A   370
K 1096         K   371
T 1097         A   372
A 1098         R   373
R 1099         R   374
Y 1100         A   375
Q 1101         K   376
Q 1102         K   377
K 1103         E   378
L 1104         M   379
E 1105         V   380
E 1106         E   381
K 1107         A   382
Q 1108         N   383
A 1109         L   384
E 1110         R   385
N 1111         L   386
L 1112         V   387
R 1113         I   388
A 1114         S   389
I 1115         I   390
Q 1116         A   391
E 1117         K   392
K 1118         K   393
E 1119         Y   394
G 1120         T   395
Q 1121         N   396
L 1122         R   397
Q 1123         G   398
Q 1124         L   399
E 1125         Q   400
A 1126         F   401
V 1127         L   402
A 1128         D   403
E 1129         L   404
Y 1130         I   405
E 1131         Q   406
E 1132         E   407
K 1133         G   408
L 1134         N   409
K 1135         I   410
T 1136         G   411
L 1137         L   412
T 1138         M   413
V 1139         K   414
E 1140         A   415
V 1141         V   416
Q 1142         D   417
E 1143         K   418
M 1144         F   419
V 1145         E   420
K 1146         Y   421
N 1147         R   422
Y 1148         R   423
M 1149         G   424
K 1150         Y   425
E 1151         K   426
V 1152         F   427
F 1153         S   428
P 1154         T   429
TER
END

