
PFRMAT AL
TARGET T0124
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.15 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1d1da
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1d1d_A
F  904        W    11
L  905        T    12
K  906        P    13
L  907        L    14
L  908        E    15
K  909        P    16
K  910        K    17
Q  911        L    18
E  912        I    19
K  913        T    20
E  914        R    21
L  915        L    22
K  916        A    23
E  917        D    24
L  918        T    25
E  919        V    26
R  920        R    27
K  921        T    28
G  922        K    29
S  923        G    30
K  924        L    31
R  925        R    32
R  926        S    33
E  927        P    34
E  928        I    35
L  929        T    36
L  930        M    37
Q  931        A    38
K  932        E    39
Y  933        V    40
S  934        E    41
V  935        A    42
L  936        L    43
F  937        M    44
L  938        S    45
E  939        S    46
P  940        P    47
V  941        L    48
Y  942        L    49
P  943        P    50
R  944        H    51
G  945        D    52
L  979        V    53
D  980        T    54
S  981        N    55
Q  982        L    56
V  983        M    57
V  984        R    58
E  985        V    59
L  986        I    60
K  987        L    61
E  988        G    62
R  989        P    63
L  990        A    64
E  991        P    65
M  992        Y    66
E  993        A    67
L  994        L    68
I  995        W    69
H  996        M    70
L  997        D    71
G  998        A    72
E  999        W    73
E 1000        G    74
Y 1001        V    75
H 1002        Q    76
D 1003        L    77
G 1004        Q    78
I 1005        T    79
R 1006        V    80
R 1007        I    81
R 1008        A    82
K 1009        A    83
E 1010        A    84
Q 1011        T    85
H 1012        R    86
A 1013        D    87
T 1014        P    88
E 1015        R    89
Q 1016        H    90
T 1017        P    91
A 1018        A    92
K 1019        N    93
I 1020        G    94
T 1021        Q    95
E 1022        G    96
L 1023        R    97
A 1024        G    98
R 1025        E    99
E 1026        R   100
K 1027        T   101
Q 1028        N   102
I 1029        L   103
A 1030        D   104
E 1031        R   105
L 1032        L   106
K 1033         K   107
A 1034         G   108
L 1035         L   109
K 1036         A   110
E 1037         D   111
S 1038         G   112
S 1039         M   113
E 1040         V   114
S 1041         G   115
N 1042         N   116
I 1043         P   117
K 1044         Q   118
D 1045         G   119
I 1046         Q   120
K 1047         A   121
K 1048         A   122
K 1049         L   123
L 1050         L   124
E 1051         R   125
A 1052         P   126
K 1053         G   127
R 1054         E   128
L 1055         L   129
D 1056         V   130
R 1057         A   131
I 1058         I   132
Q 1059         T   133
V 1060         A   134
M 1061         S   135
M 1062         A   136
R 1063         L   137
S 1064         Q   138
T 1065         A   139
S 1066         F   140
D 1067         R   141
K 1068         E   142
A 1069         V   143
A 1070         A   144
Q 1071         R   145
E 1072         L   146
R 1073         A   147
L 1074         E   148
K 1075         P   149
K 1076         A   150
E 1077         G   151
I 1078         P   152
N 1079         W   153
N 1080         A   154
S 1081         D   155
H 1082         I   156
I 1083         T   157
Q 1084         Q   158
E 1085         G   159
V 1086         P   160
V 1087         S   161
Q 1088         E   162
T 1089         S   163
I 1090         F   164
K 1091         V   165
L 1092         D   166
L 1093         F   167
T 1094         A   168
E 1095         N   169
K 1096         R   170
T 1097         L   171
A 1098         I   172
R 1099         K   173
Y 1100         A   174
Q 1101         V   175
Q 1102         E   176
K 1103         G   177
L 1104         S   178
E 1105         D   179
E 1106         L   180
K 1107         P   181
Q 1108         P   182
A 1109         S   183
E 1110         A   184
N 1111         R   185
L 1112         A   186
R 1113         P   187
A 1114         V   188
I 1115         I   189
Q 1116         I   190
E 1117         D   191
K 1118         C   192
E 1119         F   193
G 1120         R   194
Q 1121         Q   195
L 1122         K   196
Q 1123         S   197
Q 1124         Q   198
E 1125         P   199
A 1126         D   200
V 1127         I   201
A 1128         Q   202
E 1129         Q   203
Y 1130         L   204
E 1131         I   205
E 1132         R   206
K 1133         A   207
L 1134         A   208
K 1135         P   209
T 1136         S   210
L 1137         T   211
T 1138         L   212
V 1139         T   213
E 1140         T   214
V 1141         P   215
Q 1142         G   216
E 1143         E   217
M 1144         I   218
V 1145         I   219
K 1146         K   220
N 1147         Y   221
Y 1148         V   222
M 1149         L   223
K 1150         D   224
E 1151         R   225
V 1152         I   228
F 1153         A   229
P 1154         P   230
TER
END

