
PFRMAT AL
TARGET T0124
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1c1g_A
M  881 M 1
K  882 K 6
E  883 K 7
V  884 M 8
T  885 Q 9
Q  886 M 10
L  887 L 11
P  888 K 12
E  889 D 14
P  890 K 15
Q  891 E 16
T  892 N 17
A  893 A 18
S  894 L 19
L  895 D 20
A  896 E 24
E  897 A 25
L  898 E 26
Q  899 A 27
Q  900 D 28
M  901 K 29
K  902 K 30
L  903 A 31
F  904 A 32
L  905 E 33
K  906 D 34
L  907 R 35
L  908 S 36
K  909 K 37
K  910 Q 38
Q  911 L 39
E  912 E 40
K  913 D 41
E  914 E 42
L  915 L 43
K  916 V 44
E  917 S 45
L  918 L 46
E  919 Q 47
R  920 K 48
K  921 K 49
G  922 L 50
S  923 K 51
K  924 A 52
R  925 T 53
R  926 E 54
E  927 D 55
E  928 E 56
L  929 L 57
L  930 D 58
Q  931 K 59
K  932 Y 60
Y  933 S 61
S  934 E 62
V  935 A 63
L  936 L 64
F  937 K 65
L  938 D 66
E  939 A 67
P  940 Q 68
V  941 E 69
Y  942 K 70
P  943 L 71
R  944 E 72
G  945 L 73
L  979 A 74
D  980 E 75
S  981 K 76
Q  982 K 77
V  983 A 78
V  984 T 79
E  985 D 80
L  986 A 81
K  987 E 82
E  988 A 83
R  989 D 84
L  990 L 88
E  991 N 89
M  992 R 90
E  993 R 91
L  994 I 92
I  995 Q 93
H  996 L 94
L  997 F 95
G  998 E 96
E  999 E 97
E  1000 E 98
Y  1001 L 99
H  1002 Q 103
D  1003 E 104
G  1004 R 105
I  1005 L 106
R  1006 A 107
R  1007 T 108
R  1008 A 109
K  1009 L 110
Q  1011 Q 111
H  1012 K 112
A  1013 L 113
T  1014 E 114
E  1015 E 115
Q  1016 A 116
T  1017 E 117
A  1018 K 118
K  1019 A 119
I  1020 A 120
T  1021 D 121
E  1022 E 122
L  1023 S 123
A  1024 E 124
R  1025 R 125
E  1026 G 126
K  1027 M 127
Q  1028 K 128
I  1029 V 129
A  1030 I 130
E  1031 E 131
L  1032 S 132
K 1033 R 133
A 1034 A 134
L 1035 Q 135
K 1036 K 136
E 1037 E 142
S 1038 I 143
S 1039 Q 144
E 1040 E 145
S 1041 I 146
N 1042 Q 147
I 1043 L 148
K 1044 K 149
D 1045 E 150
I 1046 A 151
K 1047 K 152
K 1048 H 153
K 1049 I 154
L 1050 A 155
E 1051 E 156
A 1052 D 157
K 1053 A 158
R 1054 D 159
L 1055 R 160
D 1056 K 161
R 1057 Y 162
I 1058 E 163
Q 1059 E 164
V 1060 V 165
M 1061 A 166
M 1062 R 167
R 1063 K 168
S 1064 L 169
T 1065 V 170
S 1066 I 171
D 1067 I 172
K 1068 E 173
A 1069 S 174
A 1070 D 175
Q 1071 L 176
E 1072 E 177
R 1073 R 178
L 1074 A 179
K 1075 E 180
K 1076 E 181
E 1077 R 182
I 1078 A 183
N 1079 E 184
N 1080 L 185
S 1081 S 186
H 1082 E 187
I 1083 G 188
Q 1084 K 189
E 1085 E 192
V 1086 L 193
V 1087 E 194
Q 1088 E 195
T 1089 E 196
I 1090 I 197
K 1091 K 198
L 1092 T 199
L 1093 V 200
T 1094 T 201
E 1095 N 202
K 1096 N 203
T 1097 L 204
A 1098 K 205
R 1099 S 206
Y 1100 L 207
Q 1101 E 208
Q 1102 A 209
K 1103 Q 210
L 1104 A 211
E 1105 E 218
E 1106 D 219
K 1107 K 220
Q 1108 Y 221
A 1109 E 222
E 1110 E 223
N 1111 E 224
L 1112 I 225
R 1113 K 226
A 1114 V 227
I 1115 L 228
Q 1116 S 229
E 1117 D 230
K 1118 K 231
E 1119 L 232
G 1120 K 233
Q 1121 E 234
L 1122 A 235
Q 1123 E 236
Q 1124 T 237
E 1125 R 238
A 1126 A 239
V 1127 V 246
A 1128 T 247
E 1129 K 248
Y 1130 L 249
E 1131 E 250
E 1132 K 251
K 1133 S 252
L 1134 I 253
K 1135 D 254
T 1136 D 255
L 1137 L 256
T 1138 E 257
V 1139 D 258
E 1140 E 259
V 1141 L 260
Q 1142 E 272
E 1143 E 273
M 1144 H 276
V 1145 A 277
K 1146 L 278
N 1147 N 279
Y 1148 D 280
M 1149 M 281
K 1150 T 282
E 1151 S 283
V 1152 I 284
TER
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