
PFRMAT AL
TARGET T0124
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1quu_A
A  893 G 1
S  894 S 2
L  895 S 3
A  896 N 4
E  897 E 5
L  898 I 6
Q  899 R 7
Q  900 R 8
M  901 L 9
K  902 E 10
L  903 R 11
F  904 L 12
L  905 E 13
K  906 H 14
L  907 L 15
L  908 A 16
K  909 E 17
K  910 K 18
Q  911 F 19
E  912 R 20
K  913 Q 21
E  914 K 22
L  915 A 23
K  916 S 24
E  917 T 25
L  918 H 26
E  919 E 27
R  920 T 28
K  921 W 29
G  922 A 30
S  923 Y 31
K  924 G 32
R  925 K 33
R  926 E 34
E  927 Q 35
E  928 I 36
L  929 L 37
L  930 L 38
Q  931 Q 39
K  932 K 40
Y  933 D 41
S  934 Y 42
V  935 E 43
L  936 S 44
F  937 A 45
L  938 S 46
E  939 L 47
P  940 T 48
V  941 E 49
Y  942 V 50
P  943 R 51
R  944 A 52
L  979 L 53
D  980 L 54
S  981 R 55
Q  982 K 56
V  983 H 57
V  984 E 58
E  985 A 59
L  986 F 60
K  987 E 61
E  988 S 62
R  989 D 63
L  990 L 64
E  991 A 65
M  992 A 66
E  993 H 67
L  994 Q 68
I  995 D 69
H  996 R 70
L  997 V 71
G  998 E 72
E  999 Q 73
E  1000 A 76
Y  1001 I 77
H  1002 A 78
D  1003 Q 79
G  1004 E 80
I  1005 L 81
R  1006 N 82
R  1007 E 83
R  1008 L 84
K  1009 D 85
E  1010 Y 86
Q  1011 H 87
H  1012 D 88
A  1013 A 89
T  1014 V 90
E  1015 N 91
Q  1016 V 92
T  1017 N 93
A  1018 D 94
K  1019 R 95
I  1020 C 96
T  1021 Q 97
E  1022 K 98
L  1023 I 99
A  1024 C 100
K  1027 D 101
Q  1028 Q 102
I  1029 W 103
A  1030 D 104
E  1031 R 105
L  1032 L 106
K 1033 G 107
A 1034 T 108
L 1035 L 109
K 1036 T 110
E 1037 Q 111
S 1038 K 112
S 1039 R 113
E 1040 R 114
S 1041 E 115
N 1042 A 116
I 1043 L 117
K 1044 E 118
D 1045 R 119
I 1046 M 120
K 1047 E 121
K 1048 K 122
K 1049 L 123
L 1050 L 124
E 1051 E 125
A 1052 T 126
K 1053 I 127
R 1054 D 128
L 1055 Q 129
D 1056 L 130
R 1057 H 131
I 1058 L 132
Q 1059 E 133
V 1060 F 134
M 1061 A 135
M 1062 K 136
R 1063 R 137
S 1064 A 138
T 1065 A 139
S 1066 N 142
D 1067 N 143
K 1068 W 144
A 1069 M 145
A 1070 E 146
Q 1071 M 149
E 1072 E 150
R 1073 D 151
L 1074 L 152
K 1075 Q 153
K 1076 E 162
E 1077 E 163
I 1078 I 164
N 1079 Q 165
S 1081 S 166
H 1082 L 167
I 1083 I 168
Q 1084 T 169
E 1085 A 170
V 1086 H 171
V 1087 E 172
Q 1088 Q 173
T 1089 F 174
I 1090 K 175
K 1091 A 176
L 1092 T 177
L 1093 L 178
T 1094 P 179
E 1095 E 180
K 1096 A 181
T 1097 D 182
A 1098 G 183
R 1099 E 184
Y 1100 R 185
Q 1102 Q 186
K 1103 S 187
L 1104 I 188
E 1105 M 189
E 1106 A 190
K 1107 I 191
Q 1108 Q 192
A 1109 N 193
E 1110 E 194
N 1111 V 195
L 1112 E 196
R 1113 K 197
A 1114 V 198
I 1115 I 199
Q 1116 Q 200
E 1117 S 201
K 1118 Y 202
E 1119 N 203
G 1120 I 204
Q 1121 R 205
L 1122 I 206
Q 1123 S 207
Q 1124 M 217
E 1125 D 218
A 1126 E 219
V 1127 L 220
A 1128 R 221
E 1129 T 222
Y 1130 K 223
E 1131 W 224
E 1132 D 225
K 1133 K 226
L 1134 V 227
K 1135 K 228
T 1136 Q 229
L 1137 L 230
T 1138 R 234
V 1139 D 235
E 1140 Q 236
V 1141 Q 239
Q 1142 E 240
E 1143 E 241
M 1144 L 242
V 1145 A 243
K 1146 R 244
N 1147 Q 245
Y 1148 H 246
M 1149 A 247
K 1150 N 248
TER
END

