
PFRMAT AL
TARGET T0124
AUTHOR 3995-5176-6362
METHOD Chandonia & Cohen, mostly unpublished.
METHOD Uses a combination of PSI-BLAST scoring matrix
METHOD and Pred2ary secondary structure prediction.
METHOD Pred2ary page is http://www.cmpharm.ucsf.edu/~jmc/pred2ary/
METHOD The potential is documented in the paper by
METHOD Schwartz et al which is referenced on
METHOD my research page: http://www.cmpharm.ucsf.edu/~jmc/research.html
MODEL 1
PARENT 1lrv
N 880 S 18
M 881 F 19
Q 900 R 20
M 901 M 21
K 902 S 22
L 903 L 23
F 904 L 24
L 905 L 25
K 921 T 26
G 922 G 27
S 923 R 28
K 924 E 39
R 925 S 40
P 943 G 41
R 944 R 42
G 945 Q 43
L 979 I 44
D 980 D 45
S 981 R 46
Q 982 F 47
V 983 F 48
V 984 R 49
E 985 N 50
L 986 N 51
K 987 P 52
E 988 H 53
R 989 L 54
L 990 A 55
E 991 V 56
M 992 Q 57
E 993 E 65
L 994 R 66
I 995 R 67
H 996 A 68
L 997 I 69
G 998 A 70
E 999 V 71
E 1000 R 72
Y 1001 Y 73
H 1002 S 74
D 1003 P 75
G 1004 V 76
I 1005 E 77
R 1006 A 78
R 1007 L 79
R 1008 T 80
K 1009 P 81
E 1010 L 82
Q 1011 I 83
H 1012 R 84
A 1013 D 85
T 1014 S 86
E 1015 D 87
Q 1016 E 88
T 1017 V 89
A 1018 V 90
K 1019 R 91
I 1020 R 92
T 1021 A 93
E 1022 V 94
L 1023 A 95
A 1024 Y 96
R 1025 R 97
E 1026 R 100
K 1027 E 101
Q 1028 Q 102
I 1029 L 103
A 1030 S 104
E 1031 A 105
L 1032 L 106
K 1033 M 107
A 1034 F 108
L 1035 D 109
K 1036 E 110
E 1037 D 111
S 1038 R 112
S 1039 E 113
E 1040 V 114
S 1041 R 115
N 1042 I 116
I 1043 T 117
K 1044 V 118
D 1045 A 119
I 1046 D 120
K 1047 R 121
K 1048 L 122
K 1049 P 123
L 1050 L 124
E 1051 E 125
A 1052 Q 126
K 1053 L 127
R 1054 E 128
L 1055 Q 129
D 1056 M 130
R 1057 A 131
I 1058 A 132
Q 1059 D 133
V 1060 R 134
M 1061 D 135
M 1062 Y 136
R 1063 L 137
S 1064 V 138
T 1065 R 139
S 1066 A 140
D 1067 Y 141
K 1068 V 142
A 1069 V 143
A 1070 Q 144
Q 1071 R 145
I 1078 I 146
N 1079 P 147
N 1080 P 148
S 1081 G 149
H 1082 R 150
I 1083 L 151
Q 1084 F 152
E 1085 R 153
V 1086 F 154
V 1087 M 155
Q 1088 R 156
T 1089 D 157
I 1090 E 158
K 1091 D 159
L 1092 R 160
L 1093 Q 161
T 1094 V 162
E 1095 R 163
K 1096 K 164
T 1097 L 165
A 1098 V 166
R 1099 A 167
Y 1100 K 168
Q 1101 E 172
Q 1102 E 173
K 1103 S 174
L 1104 L 175
E 1105 E 185
E 1106 V 186
K 1107 R 187
Q 1108 R 188
A 1109 I 189
E 1110 V 190
N 1111 A 191
L 1112 S 192
R 1113 R 193
A 1114 L 194
I 1115 R 195
Q 1116 G 196
E 1117 D 197
K 1118 D 198
E 1119 L 199
G 1120 L 200
Q 1121 E 201
L 1122 L 202
Q 1123 W 208
Q 1124 T 209
E 1125 V 210
A 1126 R 211
V 1127 L 212
A 1128 A 213
E 1129 A 214
Y 1130 V 215
E 1131 E 216
E 1132 E 221
K 1133 A 222
L 1134 L 223
K 1135 R 224
T 1136 E 225
L 1137 L 226
T 1138 D 227
V 1139 E 228
E 1140 P 229
V 1141 D 230
Q 1142 P 231
E 1143 E 232
M 1144 V 233
V 1145 R 234
K 1146 L 235
N 1147 A 236
Y 1148 I 237
M 1149 A 238
K 1150 G 239
E 1151 R 240
V 1152 L 241
TER
END

