
PFRMAT AL
TARGET T0124
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1BG1_A
REMARK DATE	1999-01-20
REMARK SCORE	?
V 983 V 136
V 984 T 138
E 985 E 139
L 986 K 140
K 987 Q 141
E 988 Q 142
R 989 M 143
L 990 L 144
E 991 E 145
M 992 Q 146
E 993 H 147
L 994 L 148
I 995 Q 149
H 996 D 150
L 997 V 151
G 998 R 152
E 999 K 153
E 1000 R 154
Y 1001 V 155
H 1002 Q 156
D 1003 D 157
G 1004 L 158
I 1005 E 159
R 1006 Q 160
R 1007 K 161
R 1008 M 162
K 1009 K 163
E 1010 V 164
Q 1011 V 165
H 1012 E 166
A 1013 N 167
T 1014 L 168
E 1015 D 171
Q 1016 F 172
T 1017 D 173
A 1018 F 174
K 1019 N 175
I 1020 Y 176
T 1021 K 177
E 1022 T 178
L 1023 L 179
A 1024 K 180
R 1025 S 181
E 1026 Q 182
K 1027 G 183
Q 1028 D 184
S 1038 S 194
S 1039 T 196
E 1040 R 197
S 1041 Q 198
N 1042 K 199
I 1043 M 200
K 1044 Q 201
D 1045 Q 202
I 1046 L 203
K 1047 E 204
K 1048 Q 205
K 1049 M 206
L 1050 L 207
E 1051 T 208
A 1052 A 209
K 1053 L 210
R 1054 D 211
L 1055 Q 212
D 1056 M 213
R 1057 R 214
I 1058 R 215
Q 1059 S 216
V 1060 I 217
M 1061 V 218
M 1062 S 219
R 1063 E 220
S 1064 L 221
T 1065 A 222
S 1066 G 223
D 1067 L 224
K 1068 L 225
A 1069 S 226
A 1070 A 227
Q 1071 M 228
E 1072 E 229
R 1073 Y 230
L 1074 V 231
K 1075 Q 232
K 1076 K 233
E 1077 T 234
I 1078 L 235
N 1079 T 236
N 1080 D 237
S 1081 E 238
H 1082 E 239
I 1083 L 240
Q 1084 A 241
E 1085 D 242
V 1086 P 256
V 1087 N 257
Q 1088 I 258
T 1089 C 259
I 1090 L 260
K 1091 D 261
L 1092 R 262
L 1093 L 263
T 1094 E 264
E 1095 N 265
K 1096 W 266
T 1097 I 267
A 1098 T 268
R 1099 S 269
Y 1100 L 270
Q 1101 A 271
Q 1102 E 272
K 1103 S 273
L 1104 Q 274
E 1105 L 275
E 1106 Q 276
K 1107 T 277
Q 1108 R 278
A 1109 Q 279
E 1110 Q 280
N 1111 I 281
L 1112 K 282
R 1113 K 283
A 1114 L 284
I 1115 E 285
Q 1116 E 286
E 1117 L 287
K 1118 Q 288
E 1119 Q 289
G 1120 K 290
Q 1121 V 291
L 1122 S 292
Q 1123 Y 293
Q 1124 K 294
E 1125 G 295
A 1126 D 296
V 1127 P 297
A 1128 I 298
E 1129 V 299
Y 1130 Q 300
E 1131 H 301
E 1132 R 302
K 1133 P 303
L 1134 M 304
K 1135 L 305
T 1136 E 306
L 1137 E 307
T 1138 R 308
V 1139 I 309
E 1140 V 310
V 1141 E 311
Q 1142 L 312
E 1143 F 313
M 1144 R 314
V 1145 N 315
K 1146 L 316
N 1147 M 317
Y 1148 K 318
TER
END

