
PFRMAT AL
TARGET T0124
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1DG3_A
REMARK DATE	2000-02-11
REMARK SCORE	?
M 881 L 319
K 882 A 320
E 883 Q 321
V 884 I 322
T 885 E 323
Q 886 N 324
L 887 S 325
P 888 A 326
E 889 A 327
P 890 V 328
Q 891 Q 329
T 892 K 330
A 893 A 331
S 894 I 332
L 895 A 333
A 896 H 334
E 897 Y 335
L 898 E 336
Q 899 Q 337
Q 900 Q 338
M 901 M 339
K 902 G 340
L 903 Q 341
F 904 K 342
L 905 V 343
K 906 Q 344
L 907 L 345
L 908 P 346
K 909 T 347
K 910 E 348
Q 911 S 349
E 912 L 350
K 913 Q 351
E 914 E 352
L 915 L 353
K 916 L 354
E 917 D 355
L 918 L 356
E 919 H 357
R 920 R 358
K 921 D 359
G 922 S 360
S 923 E 361
K 924 R 362
R 925 E 363
R 926 A 364
E 927 I 365
E 928 E 366
L 929 V 367
L 930 F 368
Q 931 I 369
K 932 R 370
Y 933 S 371
S 934 S 372
V 935 F 373
L 936 K 374
F 937 D 375
L 938 V 376
E 939 D 377
P 940 H 378
V 941 L 379
Y 942 F 380
P 943 Q 381
R 944 K 382
G 945 E 383
L 979 L 384
D 980 A 385
S 981 A 386
Q 982 Q 387
V 983 L 388
V 984 E 389
E 985 K 390
L 986 C 396
K 987 K 397
E 988 Q 398
R 989 N 399
L 990 Q 400
E 991 E 401
M 992 A 402
E 993 S 403
L 994 S 404
I 995 D 405
H 996 R 406
L 997 C 407
G 998 S 408
E 999 G 409
E 1000 L 410
Y 1001 L 411
H 1002 Q 412
D 1003 V 413
G 1004 I 414
I 1005 F 415
R 1006 S 416
R 1007 P 417
R 1008 L 418
K 1009 E 419
E 1010 E 420
Q 1011 E 421
H 1012 V 422
A 1013 K 423
T 1014 A 424
E 1015 G 425
Q 1016 I 426
T 1017 Y 427
A 1018 S 428
K 1019 K 429
I 1020 P 430
T 1021 G 431
E 1022 G 432
L 1023 Y 433
A 1024 R 434
R 1025 L 435
E 1026 V 437
K 1027 Q 438
Q 1028 K 439
I 1029 L 440
A 1030 Q 441
E 1031 D 442
L 1032 L 443
K 1033 K 444
A 1034 K 445
L 1035 K 446
K 1036 Y 447
E 1037 Y 448
S 1038 E 449
S 1039 E 450
E 1040 P 451
S 1041 R 452
N 1042 K 453
I 1043 G 454
K 1044 I 455
D 1045 Q 456
I 1046 A 457
K 1047 E 458
K 1048 E 459
K 1049 I 460
L 1050 L 461
E 1051 Q 462
A 1052 T 463
K 1053 Y 464
R 1054 L 465
L 1055 K 466
D 1056 S 467
R 1057 K 468
I 1058 E 469
Q 1059 S 470
V 1060 M 471
M 1061 T 472
M 1062 D 473
R 1063 A 474
S 1064 I 475
T 1065 L 476
S 1066 Q 477
D 1067 T 478
K 1068 D 479
A 1069 Q 480
A 1070 T 481
Q 1071 L 482
E 1072 T 483
R 1073 E 484
L 1074 K 485
K 1075 E 486
K 1076 K 487
E 1077 E 488
I 1078 I 489
N 1079 E 490
N 1080 V 491
S 1081 V 494
H 1082 K 495
I 1083 A 496
Q 1084 E 497
E 1085 S 498
V 1086 A 499
V 1087 Q 500
Q 1088 A 501
T 1089 S 502
I 1090 A 503
K 1091 K 504
L 1092 M 505
L 1093 L 506
T 1094 H 507
E 1095 E 508
K 1096 M 509
T 1097 Q 510
A 1098 R 511
R 1099 K 512
Y 1100 N 513
Q 1101 E 514
Q 1102 Q 515
K 1103 M 516
L 1104 M 517
E 1105 E 518
E 1106 Q 519
K 1107 K 520
Q 1108 E 521
A 1109 R 522
E 1110 S 523
N 1111 Y 524
L 1112 Q 525
R 1113 E 526
A 1114 H 527
I 1115 L 528
Q 1116 K 529
E 1117 Q 530
K 1118 L 531
E 1119 T 532
G 1120 E 533
Q 1121 K 534
L 1122 M 535
Q 1123 E 536
Q 1124 N 537
E 1125 D 538
A 1126 R 539
V 1127 V 540
A 1128 Q 541
E 1129 L 542
Y 1130 L 543
E 1131 K 544
E 1132 E 545
K 1133 Q 546
L 1134 E 547
K 1135 R 548
T 1136 T 549
L 1137 L 550
T 1138 A 551
V 1139 L 552
E 1140 K 553
V 1141 L 554
Q 1142 Q 555
E 1143 E 556
M 1144 L 561
V 1145 K 562
K 1146 E 563
N 1147 G 564
Y 1148 F 565
M 1149 Q 566
K 1150 K 567
E 1151 E 568
TER
END

