
PFRMAT AL
TARGET T0125
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.00 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1d8ca
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1d8c_A
F   1     Q     7
D   2     S     8
D   3     R     9
V   4     L    10
V   5     R    11
V   6     I    12
S   7     D    13
R   8     A    14
Q   9     N    15
E  10     F    16
Q  11     K    17
S  12     R    18
Y  13     F    19
V  14     V    20
Q  15     D    21
R  16     E    22
G  17     E    23
M  18     V    24
V  19     L    25
N  20     P    26
F  21     G    27
L  22     T    28
D  23     G    29
E  24     L    30
E  25     D    31
M  26     A    32
H  27     A    33
K  28     A    34
L  29     F    35
V  30     W    36
K  31     R    37
R  32     N    38
F  33     F    39
R  34     D    40
D  35     E    41
M  36     I    42
R  37     V    43
W  38     H    44
N  39     D    45
L  40     L    46
G  41     A    47
P  42     P    48
G  43     E    49
F  44     N    50
V  45     R    51
F  46     Q    52
L  47     L    53
L  48     L    54
K  49     A    55
N  52     E    56
R  53     R    57
E  54     D    58
R  55     R    59
M  56     I    60
M  57     Q    61
R  58     A    62
Y  59     A    63
C  60     L    64
M  61     D    65
D  62     E    66
Y  63     W    67
A  64     H    68
R  65     R    69
Y  66     S    70
S  67     N    71
K  68     P    72
K  69     G    73
I  70     P    74
L  71     V    75
Q  72     K    76
N  79     D    77
K  80     K    78
K  81     A    79
T  82     A    80
L  83     Y    81
T  84     K    82
K  85     S    83
M  86     F    84
G  87     L    85
R  88     R    86
F  89     E    87
V  90     L    88
G  91     G    89
Y  92     Y    90
R  93     L    91
N  94     V    92
Y  95     P    93
M 121     Q    94
R 122     P    95
K 123     E    96
Y 124     R    97
S 125     V    98
S 126     T    99
K 127     V   100
D 128     E   101
P 129     T   102
G 130     T   103
T 131     G   104
F 132     I   105
P 133     D   106
C 134     S   107
K 135     E   108
N 136     I   109
E 137     T   110
K 138     S   111
R 139     Q   112
R 140     A   113
G 141     G   114
TER
END

