
PFRMAT AL
TARGET T0125
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.95 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1d2za
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1d2z_A
F   1     L    28
D   2     D    29
D   3     N    30
V   4     T    31
V   5     M    32
V   6     A    33
S   7     I    34
R   8     R    35
Q   9     L    36
E  10     L    37
Q  11     P    38
S  12     L    39
Y  13     P    40
V  14     V    41
Q  15     R    42
R  16     A    43
G  17     Q    44
M  18     L    45
V  19     C    46
N  20     A    47
F  21     H    48
L  22     L    49
D  23     D    50
E  24     A    51
E  25     L    52
K  31     D    53
R  32     V    54
F  33     W    55
R  34     Q    56
D  35     Q    57
M  36     L    58
R  37     A    59
W  38     T    60
N  39     A    61
L  40     V    62
G  41     K    63
L  48     L    64
K  49     Y    65
K  50     P    66
V  51     D    67
N  52     Q    68
R  53     V    69
E  54     E    70
R  55     Q    71
M  56     I    72
M  57     S    73
R  58     S    74
Y  59     Q    75
C  60     K    76
M  61     Q    77
D  62     R    78
Y  63     G    79
A  64     R    80
R  65     S    81
Y  66     A    82
S  67     S    83
K  68     N    84
K  69     E    85
I  70     F    86
L  71     L    87
Q  72     N    88
L  73     I    89
K  74     W    90
H  75     G    91
L  76     G    92
P  77     Q    93
V  78     Y    94
N  79     N    95
E 100     H    96
L 101     T    97
Y 102     V    98
A 103     Q    99
D 104     T   100
V 105     L   101
F 106     F   102
R 107     A   103
D 108     L   104
V 109     F   105
Q 110     K   106
G 111     K   107
F 112     L   108
R 113     K   109
G 114     L   110
P 115     H   111
K 116     N   112
M 117     A   113
T 118     M   114
A 119     R   115
A 120     L   116
M 121     I   117
R 122     K   118
K 123     D   119
Y 124     Y   120
S 125     V   121
S 126     S   122
K 127     E   123
D 128     D   124
P 129     L   125
G 130     H   126
T 131     K   127
F 132     Y   128
P 133     I   129
TER
END

