
PFRMAT AL
TARGET T0125
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1mol_B
V 4 I 6
V 5 D 7
V 6 I 8
S 7 G 9
R 8 P 10
Q 9 F 11
E 10 T 12
Q 11 Q 13
S 12 N 14
Y 13 L 15
V 14 G 16
Q 15 K 17
R 16 F 18
G 17 A 19
M 18 V 20
V 19 D 21
N 20 E 22
F 21 E 23
E 24 N 24
E 25 K 25
M 26 I 26
H 27 G 27
K 28 Q 28
L 29 Y 29
V 30 G 30
K 31 R 31
R 34 L 32
D 35 T 33
M 36 F 34
R 37 N 35
W 38 K 36
N 39 V 37
L 40 I 38
G 41 R 39
P 42 P 40
G 43 C 41
F 44 M 42
V 45 K 43
F 46 K 44
L 47 T 45
L 48 I 46
K 49 Y 47
K 50 E 48
V 51 N 49
N 52 E 50
R 53 R 51
E 54 E 52
R 55 I 53
M 56 K 54
M 57 G 55
R 58 Y 56
Y 59 E 57
C 60 Y 58
M 61 Q 59
D 62 L 60
Y 63 Y 61
A 64 V 62
R 65 Y 63
Y 66 A 64
S 67 S 65
Q 72 D 66
L 73 K 67
K 74 L 68
H 75 F 69
L 76 R 70
P 77 A 71
V 78 D 72
N 79 I 73
K 80 S 74
K 81 E 75
T 82 D 76
L 83 Y 77
T 84 K 78
K 85 T 79
M 86 R 80
G 87 G 81
R 88 R 82
F 89 K 83
V 90 L 84
G 91 L 85
Y 92 R 86
R 93 F 87
N 94 N 88
TER
END

